RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ATP5J2P56134 94 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 TMEM33P57088 247 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 TSPAN5P62079 268 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 ASAH1Q13510 395 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 FAM201AQ5SY85 155 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 SHEQ5VZ18 495 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 OLFML2AQ68BL7 652 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 SIGIRRQ6IA17 410 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 STEAP1BQ6NZ63 245 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 Q6P435 159 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 CLEC2AQ6UVW9 174 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 OR8B3Q8NGG8 313 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 OR4K15Q8NH41 348 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 H1FXQ92522 213 aaKnown RBP8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 DYRK2Q92630 601 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 TRIM63Q969Q1 353 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 OR8B2Q96RD0 313 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 CCL13Q99616 98 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 OCSTAMPQ9BR26 566 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 PIMREGQ9BSJ6 248 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 FAM234AQ9H0X4 552 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 TMEM165Q9HC07 324 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 NECAP2Q9NVZ3 263 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 LPAR3Q9UBY5 353 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 SCP2D1Q9UJQ7 156 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 KCNK7Q9Y2U2 307 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 PKDREJQ9NTG1 2253 aa8.61□□□□□ -1.03
PRPF38A-202ENST00000474048 UBR5O95071 2799 aaPredicted RBP8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 TRGV10A0A0A0MS01 117 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 A0A1W2PPH5 198 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 LYNX1G3V0Z9 82 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 SIGLEC5O15389 551 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 SSX4O60224 188 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 TK1P04183 234 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 AMY2AP04746 511 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 CSN2P05814 226 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 LYNX1P0DP58 116 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 COL8A2P25067 703 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 LMO1P25800 156 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 COL8A1P27658 744 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 AVPI1Q5T686 147 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 SLC35E4Q6ICL7 350 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 HOGA1Q86XE5 327 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 CD177Q8N6Q3 437 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF565Q8N9K5 539 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 ANGPTL6Q8NI99 470 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 CCDC107Q8WV48 283 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 NINJ1Q92982 152 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 SDSLQ96GA7 329 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 SDHCQ99643 169 aaPredicted RBP8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 GINS4Q9BRT9 223 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 DPAGT1Q9H3H5 408 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 EHFQ9NZC4 300 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 OR6C3Q9NZP0 311 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 COPZ2Q9P299 210 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 SLC25A10Q9UBX3 287 aaPredicted RBP8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 MIOXQ9UGB7 285 aa8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 ELF5Q9UKW6 265 aaPredicted RBP8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 RBMX2Q9Y388 322 aaKnown RBP8.6□□□□□ -1.03
PRPF38A-202ENST00000474048 ROS1P08922 2347 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 K7N7A8 449 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 SPINT2O43291 252 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 HSPA12AO43301 675 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 LANCL1O43813 399 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 SSX5O60225 188 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 LY6HO94772 140 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 MT-ND4P03905 459 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 CD3DP04234 171 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 CTXN2P0C2S0 81 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 IL2RGP31785 369 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 HRH1P35367 487 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 OR3A1P47881 315 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 DSCR9P59020 149 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 HLA-DRB3P79483 266 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 AESQ08117 197 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 CDK10Q15131 360 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 ZMYND11Q15326 602 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 SCGB2B2Q4G0G5 96 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 TMEM155Q4W5P6 130 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 PLET1Q6UQ28 207 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF497Q6ZNH5 498 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF788Q6ZQV5 615 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 TGIF2LYQ8IUE0 185 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 PRR18Q8N4B5 295 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 GVQW1Q8N7I0 195 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 FAM216BQ8N7L0 139 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNRF1Q8ND25 227 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 OR4S1Q8NGB4 309 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 OR5AP2Q8NGF4 316 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 MAFIPQ8WZ33 124 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 FAM168AQ92567 244 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 RAB39BQ96DA2 213 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 PERPQ96FX8 193 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 GAFA1Q96PS6 74 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 PRRT1Q99946 306 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 TMEM246Q9BRR3 403 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 HDHD3Q9BSH5 251 aaPredicted RBP8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 DCAF16Q9NXF7 216 aa8.59□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF581Q9P0T4 197 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms