RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 IFT46Q9NQC8 304 aa11.08□□□□□ -0.64
BRAT1-205ENST00000473879 TAS2R8Q9NYW2 309 aa11.08□□□□□ -0.64
BRAT1-205ENST00000473879 DYSFO75923 2080 aa11.08□□□□□ -0.64
BRAT1-205ENST00000473879 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.08□□□□□ -0.642e-6■□□□□ 11.1
BRAT1-205ENST00000473879 TRAV38-1A0A0B4J264 116 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 A0A1W2PQ09 198 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 OOEPA6NGQ2 149 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 RFPL4AA6NLU0 287 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 OR2AT4A6NND4 320 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 RFPL4AL1F8VTS6 287 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.07□□□□□ -0.64
BRAT1-205ENST00000473879 LGALS8O00214 317 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 ECDO95905 644 aaPredicted RBP11.07□□□□□ -0.64
BRAT1-205ENST00000473879 GSTT2BP0CG30 244 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 PTHLHP12272 177 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 GDNFP39905 211 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 MDH2P40926 338 aaKnown RBP11.07□□□□□ -0.64
BRAT1-205ENST00000473879 KCNJ3P48549 501 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 DEFA1P59665 94 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 DEFA3P59666 94 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 PDCD1Q15116 288 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 KCNJ8Q15842 424 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 PAN3Q58A45 887 aaKnown RBP11.07□□□□□ -0.64
BRAT1-205ENST00000473879 TEX36Q5VZQ5 186 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 ZNF57Q68EA5 555 aaPredicted RBP11.07□□□□□ -0.64
BRAT1-205ENST00000473879 Q6P435 159 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 TRAPPC6BQ86SZ2 158 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 SUMF2Q8NBJ7 301 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 NUDCD2Q8WVJ2 157 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 TRIM63Q969Q1 353 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 SEH1LQ96EE3 360 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 SULT4A1Q9BR01 284 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 DPCDQ9BVM2 203 aaPredicted RBP11.07□□□□□ -0.64
BRAT1-205ENST00000473879 TREM2Q9NZC2 230 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 MTFP1Q9UDX5 166 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 KCNK7Q9Y2U2 307 aa11.07□□□□□ -0.64
BRAT1-205ENST00000473879 RBMX2Q9Y388 322 aaKnown RBP11.07□□□□□ -0.64
BRAT1-205ENST00000473879 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
BRAT1-205ENST00000473879 PPIAL4EA0A075B759 164 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 MEIOCA2RUB1 952 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 NKX6-3A6NJ46 265 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 PPIAL4DF5H284 164 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 C3orf80F5H4A9 247 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 SIRPB1O00241 398 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 SLC33A1O00400 549 aaPredicted RBP11.06□□□□□ -0.64
BRAT1-205ENST00000473879 PPIHO43447 177 aaKnown RBP11.06□□□□□ -0.64
BRAT1-205ENST00000473879 CSF1P09603 554 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 PPIAL4FP0DN26 164 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 PSG2P11465 335 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 LMO1P25800 156 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 IL2RGP31785 369 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 PRDX2P32119 198 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 RCVRNP35243 200 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 GUCA2AQ02747 115 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 STEAP3Q658P3 488 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 PEG10Q86TG7 708 aaKnown RBP11.06□□□□□ -0.64
BRAT1-205ENST00000473879 PRIMA1Q86XR5 153 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 LYSMD2Q8IV50 215 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 TOMM5Q8N4H5 51 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 PPP1R35Q8TAP8 253 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 SETD6Q8TBK2 473 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 DEDD2Q8WXF8 326 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 CMSS1Q9BQ75 279 aaKnown RBP11.06□□□□□ -0.64
BRAT1-205ENST00000473879 FAAP24Q9BTP7 215 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 CHST6Q9GZX3 395 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 RIMS4Q9H426 269 aaPredicted RBP11.06□□□□□ -0.64
BRAT1-205ENST00000473879 C12orf4Q9NQ89 552 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 ZNF581Q9P0T4 197 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 ZNF107Q9UII5 783 aaPredicted RBP11.06□□□□□ -0.64
BRAT1-205ENST00000473879 AK3Q9UIJ7 227 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 CDC42EP3Q9UKI2 254 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 KCNS2Q9ULS6 477 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 PPIAL4AQ9Y536 164 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 CACNG2Q9Y698 323 aa11.06□□□□□ -0.64
BRAT1-205ENST00000473879 MXRA5Q9NR99 2828 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 IGKV1D-17A0A075B6S4 117 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 IGHV3OR15-7A0A075B7D8 119 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 TRAV24A0A0B4J272 114 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 UBE2QL1A1L167 161 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 ORC5O43913 435 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 FSTL3O95633 263 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 TGFAP01135 160 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 DTYMKP23919 212 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 GABRA2P47869 451 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 CEBPDP49716 269 aaPredicted RBP11.05□□□□□ -0.64
BRAT1-205ENST00000473879 CHRFAM7AQ494W8 412 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 OLFML2AQ68BL7 652 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 STUMQ69YW2 141 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 SFRP4Q6FHJ7 346 aaPredicted RBP11.05□□□□□ -0.64
BRAT1-205ENST00000473879 RTN4RL2Q86UN3 420 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 ZNF561Q8N587 486 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 LINC01356Q8N9X3 169 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 CLDND2Q8NHS1 167 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 ANGPTL6Q8NI99 470 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 TIMD4Q96H15 378 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 C7orf50Q9BRJ6 194 aaKnown RBP11.05□□□□□ -0.64
BRAT1-205ENST00000473879 DNTTIP1Q9H147 329 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 CHMP1AQ9HD42 196 aaPredicted RBP11.05□□□□□ -0.64
BRAT1-205ENST00000473879 ETAA1Q9NY74 926 aa11.05□□□□□ -0.64
BRAT1-205ENST00000473879 KLK11Q9UBX7 282 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms