RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CDH26Q8IXH8 852 aa15.39■□□□□ 0.05
PTCD3-210ENST00000473829 PLPPR1Q8TBJ4 325 aa15.39■□□□□ 0.05
PTCD3-210ENST00000473829 S100A13Q99584 98 aa15.39■□□□□ 0.05
PTCD3-210ENST00000473829 ACOT13Q9NPJ3 140 aa15.39■□□□□ 0.05
PTCD3-210ENST00000473829 TRGV10A0A0A0MS01 117 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 FAM181BA6NEQ2 426 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 ODF3BA8MYP8 253 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 OR7C1O76099 320 aaPredicted RBP15.38■□□□□ 0.05
PTCD3-210ENST00000473829 PAHP00439 452 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 GABARAPL2P60520 117 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 HSD17B12Q53GQ0 312 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 AWAT1Q58HT5 328 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 PRAMEF5Q5TYX0 476 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 RSBN1Q5VWQ0 802 aaPredicted RBP15.38■□□□□ 0.05
PTCD3-210ENST00000473829 C12orf54Q6X4T0 127 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 SUMF2Q8NBJ7 301 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 CORO2AQ92828 525 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 CYYR1Q96J86 154 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 Q9H521 79 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 IFT22Q9H7X7 185 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 TCF7L1Q9HCS4 588 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 KIF25Q9UIL4 384 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 SESN1Q9Y6P5 492 aa15.38■□□□□ 0.05
PTCD3-210ENST00000473829 FUOMA2VDF0 154 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 ZNF780AO75290 641 aaPredicted RBP15.37■□□□□ 0.05
PTCD3-210ENST00000473829 GTF2F2P13984 249 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 FABP5Q01469 135 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 EMX1Q04741 257 aaPredicted RBP15.37■□□□□ 0.05
PTCD3-210ENST00000473829 SSX1Q16384 188 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 ZNF626Q68DY1 528 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 ZNF367Q7RTV3 350 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 DYNAPQ8N1N2 210 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 BEND2Q8NDZ0 799 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 TMEM104Q8NE00 496 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 OR11H6Q8NGC7 330 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 PHYHIPQ92561 330 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 UQCC2Q9BRT2 126 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 DPCDQ9BVM2 203 aaPredicted RBP15.37■□□□□ 0.05
PTCD3-210ENST00000473829 BANF2Q9H503 90 aa15.37■□□□□ 0.05
PTCD3-210ENST00000473829 FAM90A8PA6NJQ4 464 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 GPR137BO60478 399 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 ARG1P05089 322 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 SRMP19623 302 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 OMGP23515 440 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 CDK2P24941 298 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 RELBQ01201 579 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 C17orf58Q2M2W7 97 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 MPV17LQ2QL34 196 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 UTF1Q5T230 341 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 BRICD5Q6PL45 260 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 LINC00596Q86U02 117 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 OR13A1Q8NGR1 328 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 OR13D1Q8NGV5 346 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 GFI1Q99684 422 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 TMEM133Q9H2Q1 129 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 DPAGT1Q9H3H5 408 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 GAL3ST2Q9H3Q3 398 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 TAS2R3Q9NYW6 316 aa15.36■□□□□ 0.05
PTCD3-210ENST00000473829 MEIKINA0A087WXM9 373 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 IGHV2-26A0A0B4J1V2 119 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 MEGF11A6BM72 1044 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 FAM172BPA6NC97 362 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 MGMTP16455 207 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 GLP1RP43220 463 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 PAX5Q02548 391 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 GPR176Q14439 515 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 HEPN1Q6WQI6 88 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 MEGF9Q9H1U4 602 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 KCNK15Q9H427 330 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 PCDHB16Q9NRJ7 776 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 C1RLQ9NZP8 487 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 VPREB3Q9UKI3 123 aa15.35■□□□□ 0.05
PTCD3-210ENST00000473829 TRAV39A0A0B4J263 110 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 H3BUX3 64 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 CGB3P0DN86 165 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 CGB7P0DN87 165 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 CD37P11049 281 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 PSMA1P25786 263 aaKnown RBP15.34■□□□□ 0.05
PTCD3-210ENST00000473829 CFPP27918 469 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 GABRA5P31644 462 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 LGALS4P56470 323 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 DYNC1I2Q13409 638 aaKnown RBP15.34■□□□□ 0.05
PTCD3-210ENST00000473829 TRAM1Q15629 374 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 C1orf100Q5SVJ3 147 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 ATAD3CQ5T2N8 411 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 SPARTQ8N0X7 666 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 DYRK2Q92630 601 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 FAM46BQ96A09 425 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 Q96M66 194 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 SSX3Q99909 188 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 OR6C3Q9NZP0 311 aa15.34■□□□□ 0.05
PTCD3-210ENST00000473829 RCC2Q9P258 522 aaKnown RBP15.34■□□□□ 0.05
PTCD3-210ENST00000473829 ZNF729A6NN14 1252 aaPredicted RBP15.33■□□□□ 0.04
PTCD3-210ENST00000473829 MRPS14O60783 128 aaKnown RBP15.33■□□□□ 0.04
PTCD3-210ENST00000473829 CRTAPO75718 401 aaPredicted RBP15.33■□□□□ 0.04
PTCD3-210ENST00000473829 MDKP21741 143 aaPredicted RBP15.33■□□□□ 0.04
PTCD3-210ENST00000473829 KCNJ3P48549 501 aa15.33■□□□□ 0.04
PTCD3-210ENST00000473829 FOXL1Q12952 345 aa15.33■□□□□ 0.04
PTCD3-210ENST00000473829 GLT8D1Q68CQ7 371 aa15.33■□□□□ 0.04
PTCD3-210ENST00000473829 OR10K2Q6IF99 312 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms