RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 FAM172BPA6NC97 362 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 H0YJX3 145 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 GABRPO00591 440 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 XPNPEP2O43895 674 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 WBP4O75554 376 aaKnown RBP12.22□□□□□ -0.45
VTI1A-203ENST00000472892 CEACAM3P40198 252 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 ARHGDIBP52566 201 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 CD83Q01151 205 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 ATXN7L3Q14CW9 347 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-203ENST00000472892 TMEM95Q3KNT9 176 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 CCDC58Q4VC31 144 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 ARSJQ5FYB0 599 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-203ENST00000472892 UTF1Q5T230 341 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 TPTE2P1Q5T6R2 138 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 OR5AU1Q8NGC0 362 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 OR51A2Q8NGJ7 313 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 CNIH3Q8TBE1 160 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 RGP1Q92546 391 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-203ENST00000472892 R3HDM4Q96D70 268 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 CPNE2Q96FN4 548 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-203ENST00000472892 RBM14Q96PK6 669 aaKnown RBP12.22□□□□□ -0.45
VTI1A-203ENST00000472892 LINC00574Q9H8X3 128 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 ING3Q9NXR8 418 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 PLXNB1O43157 2135 aa12.22□□□□□ -0.45
VTI1A-203ENST00000472892 OOSP1A8MZH6 123 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 MAGEB3O15480 346 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 OR2F2O95006 317 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 AMY1AP04745 511 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 AMY2AP04746 511 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 PAX5Q02548 391 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 IL13RA2Q14627 380 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 SMN1Q16637 294 aaKnown RBP12.21□□□□□ -0.45
VTI1A-203ENST00000472892 ZSCAN26Q16670 478 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 FBLN7Q53RD9 439 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 KIAA2026Q5HYC2 2103 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 RPL22L1Q6P5R6 122 aaKnown RBP12.21□□□□□ -0.45
VTI1A-203ENST00000472892 SATL1Q86VE3 508 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 OR9G1Q8NH87 305 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 GPR148Q8TDV2 347 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 TNFAIP8L1Q8WVP5 186 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 KIRREL1Q96J84 757 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 NR1H4Q96RI1 486 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-203ENST00000472892 SLC25A33Q9BSK2 321 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 BARHL1Q9BZE3 327 aa12.21□□□□□ -0.45
VTI1A-203ENST00000472892 MEIKINA0A087WXM9 373 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 NFYBP25208 207 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 DCKP27707 260 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 C21orf33P30042 268 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-203ENST00000472892 SOX2P48431 317 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 KCNJ3P48549 501 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 ETV1P50549 477 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 PAN3Q58A45 887 aaKnown RBP12.2□□□□□ -0.46
VTI1A-203ENST00000472892 OXLD1Q5BKU9 147 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 XAF1Q6GPH4 301 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 CCDC144NLQ6NUI1 221 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 CENPVQ7Z7K6 275 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-203ENST00000472892 WFDC9Q8NEX5 89 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 OR13A1Q8NGR1 328 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 CAPSLQ8WWF8 208 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 RDH12Q96NR8 316 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 GPER1Q99527 375 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 TAS2R4Q9NYW5 299 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-203ENST00000472892 KIF25Q9UIL4 384 aa12.2□□□□□ -0.46
VTI1A-203ENST00000472892 FAM90A18PA6NE21 464 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 FAM90A16PA6NEW6 464 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 FAM90A20PA6NIJ5 464 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 FAM90A9PA6NNJ1 464 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 FAM90A12PA8MX19 464 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 FAM90A5PA8MXJ8 464 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 NPIPB11E5RHQ5 1161 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 J3QR06 171 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 HSPB6O14558 160 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 OGG1O15527 345 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 CD2P06729 351 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 FAM90A15PP0C7V4 464 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 FAM90A13PP0C7W8 464 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 FAM90A14PP0C7W9 464 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 FAM90A24PP0C7X0 464 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 MNDAP41218 407 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 OR3A4PP47883 348 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 RSU1Q15404 277 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 PIGYQ3MUY2 71 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 ABCA11PQ4W5N1 156 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 TCTEX1D4Q5JR98 221 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 OR2G6Q5TZ20 316 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 RSBN1Q5VWQ0 802 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-203ENST00000472892 REC114Q7Z4M0 266 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 THNSL2Q86YJ6 484 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 ZNF555Q8NEP9 628 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 OR10K1Q8NGX5 313 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 BABAM2Q9NXR7 383 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 SMPD3Q9NY59 655 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-203ENST00000472892 CALYQ9NYX4 217 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 IDI2-AS1Q9NZ38 188 aa12.19□□□□□ -0.46
VTI1A-203ENST00000472892 SIRT4Q9Y6E7 314 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-203ENST00000472892 M0QZK8 103 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 HTR3BO95264 441 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 IL1AP01583 271 aa12.18□□□□□ -0.46
VTI1A-203ENST00000472892 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms