RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 COQ2Q96H96 371 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.94■□□□□ 0.14
PSPC1-203ENST00000471658 BAHCC1Q9P281 2608 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 ASH1LQ9NR48 2969 aaKnown RBP15.94■□□□□ 0.14
PSPC1-203ENST00000471658 TRAV39A0A0B4J263 110 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 NDUFB3O43676 98 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 GLAP06280 429 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 FCER2P06734 321 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 NDUFB7P17568 137 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 ARFRP1Q13795 201 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 RBM39Q14498 530 aaKnown RBP15.94■□□□□ 0.14
PSPC1-203ENST00000471658 PYDC2Q56P42 97 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 Q6ZPA2 131 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 OR8H2Q8N162 312 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 NEIL1Q96FI4 390 aaPredicted RBP15.94■□□□□ 0.14
PSPC1-203ENST00000471658 TSC22D3Q99576 134 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 SLC25A10Q9UBX3 287 aaPredicted RBP15.94■□□□□ 0.14
PSPC1-203ENST00000471658 MIOXQ9UGB7 285 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 H3BUI4 141 aa15.93■□□□□ 0.14
PSPC1-203ENST00000471658 MGST3O14880 152 aa15.93■□□□□ 0.14
PSPC1-203ENST00000471658 IL2RGP31785 369 aa15.93■□□□□ 0.14
PSPC1-203ENST00000471658 PRSS3P35030 304 aa15.93■□□□□ 0.14
PSPC1-203ENST00000471658 GLIPR1P48060 266 aa15.93■□□□□ 0.14
PSPC1-203ENST00000471658 LMO4P61968 165 aa15.93■□□□□ 0.14
PSPC1-203ENST00000471658 DGCR2P98153 550 aa15.93■□□□□ 0.14
PSPC1-203ENST00000471658 RSBN1Q5VWQ0 802 aaPredicted RBP15.93■□□□□ 0.14
PSPC1-203ENST00000471658 BAIAP2L2Q6UXY1 529 aa15.93■□□□□ 0.14
PSPC1-203ENST00000471658 C5orf24Q7Z6I8 188 aa15.93■□□□□ 0.14
PSPC1-203ENST00000471658 OR52I2Q8NH67 350 aa15.93■□□□□ 0.14
PSPC1-203ENST00000471658 SDHCQ99643 169 aaPredicted RBP15.93■□□□□ 0.14
PSPC1-203ENST00000471658 CMSS1Q9BQ75 279 aaKnown RBP15.93■□□□□ 0.14
PSPC1-203ENST00000471658 SERPINE3A8MV23 424 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 F5H0A9 414 aaPredicted RBP15.92■□□□□ 0.14
PSPC1-203ENST00000471658 IGHV2-5P01817 119 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 GNG2P59768 71 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 ZNF45Q02386 682 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 PNLIPRP3Q17RR3 467 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 KRBOX4Q5JUW0 171 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 SHEQ5VZ18 495 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 ZNF497Q6ZNH5 498 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 OR8B3Q8NGG8 313 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 OR4K15Q8NH41 348 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 PPP1R35Q8TAP8 253 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 CCDC107Q8WV48 283 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 S100ZQ8WXG8 99 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 MAFIPQ8WZ33 124 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 OR8B2Q96RD0 313 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 DCTN5Q9BTE1 182 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 SRRQ9GZT4 340 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 FAM234AQ9H0X4 552 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 ZNF230Q9UIE0 474 aaPredicted RBP15.92■□□□□ 0.14
PSPC1-203ENST00000471658 KIF25Q9UIL4 384 aa15.92■□□□□ 0.14
PSPC1-203ENST00000471658 J3QRK9 145 aa15.91■□□□□ 0.14
PSPC1-203ENST00000471658 PHF1O43189 567 aaPredicted RBP15.91■□□□□ 0.14
PSPC1-203ENST00000471658 MT-ND4P03905 459 aa15.91■□□□□ 0.14
PSPC1-203ENST00000471658 CD3GP09693 182 aa15.91■□□□□ 0.14
PSPC1-203ENST00000471658 EDDM3BP56851 147 aa15.91■□□□□ 0.14
PSPC1-203ENST00000471658 PITPNAQ00169 270 aa15.91■□□□□ 0.14
PSPC1-203ENST00000471658 ARL6IP1Q15041 203 aa15.91■□□□□ 0.14
PSPC1-203ENST00000471658 LRRC10Q5BKY1 277 aa15.91■□□□□ 0.14
PSPC1-203ENST00000471658 WDR25Q64LD2 544 aaPredicted RBP15.91■□□□□ 0.14
PSPC1-203ENST00000471658 GDPD3Q7L5L3 318 aa15.91■□□□□ 0.14
PSPC1-203ENST00000471658 GVQW1Q8N7I0 195 aa15.91■□□□□ 0.14
PSPC1-203ENST00000471658 OR5D13Q8NGL4 314 aa15.91■□□□□ 0.14
PSPC1-203ENST00000471658 MRPL30Q8TCC3 161 aaKnown RBP15.91■□□□□ 0.14
PSPC1-203ENST00000471658 LANCL1O43813 399 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 CSN2P05814 226 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 TRAPPC6BQ86SZ2 158 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 GPX8Q8TED1 209 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 Q96MF0 132 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 CHMP1AQ9HD42 196 aaPredicted RBP15.9■□□□□ 0.14
PSPC1-203ENST00000471658 MAP1AP78559 2803 aaPredicted RBP15.9■□□□□ 0.14
PSPC1-203ENST00000471658 CTDSPLO15194 276 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 CA11O75493 328 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 TPPPO94811 219 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 NAPSAO96009 420 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 PTBP1P26599 531 aaKnown RBP eCLIP15.9■□□□□ 0.14
PSPC1-203ENST00000471658 KCNJ3P48549 501 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 ZNF846Q147U1 533 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 SLC35E4Q6ICL7 350 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 PRSS57Q6UWY2 283 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 NLRC3Q7RTR2 1065 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 SETD6Q8TBK2 473 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 H1FXQ92522 213 aaKnown RBP15.9■□□□□ 0.14
PSPC1-203ENST00000471658 KLK11Q9UBX7 282 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 CLN8Q9UBY8 286 aa15.9■□□□□ 0.14
PSPC1-203ENST00000471658 PRRC2AP48634 2157 aaKnown RBP15.89■□□□□ 0.13
PSPC1-203ENST00000471658 MEIKINA0A087WXM9 373 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 A0A096LNT2 108 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 TMEM30CPA0ZSE6 113 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 FCGR3AP08637 254 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 SLC25A16P16260 332 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 RCC1P18754 421 aaPredicted RBP15.89■□□□□ 0.13
PSPC1-203ENST00000471658 ZFP36P26651 326 aaKnown RBP15.89■□□□□ 0.13
PSPC1-203ENST00000471658 P2RX3P56373 397 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 BAK1Q16611 211 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 GAPTQ8N292 157 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 Q8N402 240 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 WFDC11Q8NEX6 87 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 FOXC2Q99958 501 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms