RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 C1DQ13901 141 aaKnown RBP3.77□□□□□ -1.81
CCDC39-202ENST00000471307 MAD2L1BPQ15013 274 aaPredicted RBP3.77□□□□□ -1.81
CCDC39-202ENST00000471307 HAGHQ16775 308 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 CLEC12AQ5QGZ9 265 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 RBM48Q5RL73 367 aaKnown RBP3.77□□□□□ -1.81
CCDC39-202ENST00000471307 PRAMEF5Q5TYX0 476 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 PRAMEF6Q5VXH4 476 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 CARD17Q5XLA6 110 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 UTS2BQ765I0 119 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 SLC35D2Q76EJ3 337 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 FAM122BQ7Z309 247 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 DPY19L4Q7Z388 723 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 HDDC2Q7Z4H3 204 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 ENTHD1Q8IYW4 607 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 LRRC75A-AS1Q8N1F1 130 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 ARIH2OSQ8N7S6 290 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 OR9K2Q8NGE7 335 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 OR6X1Q8NH79 312 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 OR10D3Q8NH80 312 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 FNDC8Q8TC99 324 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 GON7Q9BXV9 100 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 GPR61Q9BZJ8 451 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 RNF122Q9H9V4 155 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 CALHM2Q9HA72 323 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 ELOVL3Q9HB03 270 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 CRLF2Q9HC73 371 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 SCN3BQ9NY72 215 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF226Q9NYT6 803 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 UBAP1Q9NZ09 502 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 SPRR3Q9UBC9 169 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 EIF3KQ9UBQ5 218 aaKnown RBP3.77□□□□□ -1.81
CCDC39-202ENST00000471307 GHRLQ9UBU3 117 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 SEC14L4Q9UDX3 406 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 MCTS1Q9ULC4 181 aaKnown RBP3.77□□□□□ -1.81
CCDC39-202ENST00000471307 NPIPA1Q9UND3 350 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 ITPR1Q14643 2758 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 NBEAQ8NFP9 2946 aa3.77□□□□□ -1.81
CCDC39-202ENST00000471307 CACNA1BQ00975 2339 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 TRAV26-1A0A087WT03 109 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 IGHV3-35A0A0C4DH35 117 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 IRGMA1A4Y4 181 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 PRSS37A4D1T9 235 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 OR6C65A6NJZ3 312 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF726A6NNF4 738 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 C11orf98E9PRG8 122 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 PRKYO43930 277 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 MRPS14O60783 128 aaKnown RBP3.76□□□□□ -1.81
CCDC39-202ENST00000471307 TNFAIP8O95379 198 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 NR2C1P13056 603 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 GABRA1P14867 456 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 HIST1H1CP16403 213 aaKnown RBP3.76□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF3P17036 446 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 ELK1P19419 428 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 CRABP1P29762 137 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 ACVR1BP36896 505 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 HTR5AP47898 357 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 BLVRAP53004 296 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 KLF5Q13887 457 aaPredicted RBP3.76□□□□□ -1.81
CCDC39-202ENST00000471307 PON3Q15166 354 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 C9orf129Q5T035 196 aaKnown RBP3.76□□□□□ -1.81
CCDC39-202ENST00000471307 THEM4Q5T1C6 240 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 AADACL4Q5VUY2 407 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 NXNL2Q5VZ03 156 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 LEG1Q6P5S2 330 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 UGT2A3Q6UWM9 527 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 GID4Q8IVV7 300 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF786Q8N393 782 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 OR52E2Q8NGJ4 325 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 OR2T4Q8NH00 348 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 OR4F5Q8NH21 305 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 OR4K13Q8NH42 304 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 LINC01006Q8NI28 216 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF671Q8TAW3 534 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 CNIH3Q8TBE1 160 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 DNAJA3Q96EY1 480 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 SLC25A44Q96H78 314 aaPredicted RBP3.76□□□□□ -1.81
CCDC39-202ENST00000471307 Q96M85 177 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 RBM14Q96PK6 669 aaKnown RBP3.76□□□□□ -1.81
CCDC39-202ENST00000471307 TSPAN32Q96QS1 320 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 RBP7Q96R05 134 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 IL4I1Q96RQ9 567 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 SRXN1Q9BYN0 137 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 SLC2A8Q9NY64 477 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 EMC3Q9P0I2 261 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 WARS2Q9UGM6 360 aaKnown RBP3.76□□□□□ -1.81
CCDC39-202ENST00000471307 MOKQ9UQ07 419 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 PIGLQ9Y2B2 252 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 TPRKBQ9Y3C4 175 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 RPL36Q9Y3U8 105 aaKnown RBP3.76□□□□□ -1.81
CCDC39-202ENST00000471307 MED12LQ86YW9 2145 aa3.76□□□□□ -1.81
CCDC39-202ENST00000471307 PHF3Q92576 2039 aaKnown RBP3.75□□□□□ -1.81
CCDC39-202ENST00000471307 A0A087WXM4 84 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 IGHV3-15A0A0B4J1V0 119 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 WI2-2373I1.2A0A1W2PRP0 233 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 METTL21EPA6NDL7 271 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 EFCAB10A6NFE3 127 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 SLC22A20A6NK97 555 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 TRAF3IP2O43734 574 aaPredicted RBP3.75□□□□□ -1.81
CCDC39-202ENST00000471307 RAMP1O60894 148 aa3.75□□□□□ -1.81
CCDC39-202ENST00000471307 ENTPD6O75354 484 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms