RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 ZMAT5Q9UDW3 170 aaKnown RBP4.02□□□□□ -1.77
CKS1B-204ENST00000471245 BTNL2Q9UIR0 455 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 KCNIP3Q9Y2W7 256 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 UGT2A1Q9Y4X1 527 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF780BQ9Y6R6 833 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 V9GY05 133 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 IGKV1D-8A0A087WSZ0 117 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 IGHV3-15A0A0B4J1V0 119 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 ZFP92A6NM28 416 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 B4DSR2 109 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 M0R1B8 84 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 SNAPINO95295 136 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 GABRA3P34903 492 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 NUP62P37198 522 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-204ENST00000471245 RFX3P48380 749 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 FOXA1P55317 472 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 UBA52P62987 128 aaKnown RBP4.01□□□□□ -1.77
CKS1B-204ENST00000471245 MRPS22P82650 360 aaKnown RBP4.01□□□□□ -1.77
CKS1B-204ENST00000471245 TOMM34Q15785 309 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-204ENST00000471245 VPS26BQ4G0F5 336 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 CPTPQ5TA50 214 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 C1orf146Q5VVC0 180 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 FAM71E1Q6IPT2 247 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 UGT2A3Q6UWM9 527 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 LRRC74BQ6ZQY2 392 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 Q6ZSR3 168 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 VTCN1Q7Z7D3 282 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 FAM9CQ8IZT9 166 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 C14orf178Q8N769 122 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF433Q8N7K0 673 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-204ENST00000471245 TPRX1Q8N7U7 411 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 OR51S1Q8NGJ8 323 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 OR52I1Q8NGK6 324 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 GPR151Q8TDV0 419 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 MITD1Q8WV92 249 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 ARHGDIGQ99819 225 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 EBF4Q9BQW3 602 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 FAIM2Q9BWQ8 316 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 C1QTNF6Q9BXI9 259 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 CDC42EP4Q9H3Q1 356 aaKnown RBP4.01□□□□□ -1.77
CKS1B-204ENST00000471245 TAS2R9Q9NYW1 312 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 TREM2Q9NZC2 230 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 TIMM22Q9Y584 194 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 SLC25A15Q9Y619 301 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 DOCK11Q5JSL3 2073 aa4.01□□□□□ -1.77
CKS1B-204ENST00000471245 DNAH9Q9NYC9 4486 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF879B4DU55 563 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 ATP6V1G2-DDX39BF2Z307 99 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 POLR3GO15318 223 aaPredicted RBP4□□□□□ -1.77
CKS1B-204ENST00000471245 OR2J3O76001 311 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 KCNK2O95069 426 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 GSTM3P21266 225 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 RBMXP38159 391 aaKnown RBP4□□□□□ -1.77
CKS1B-204ENST00000471245 SERPINB8P50452 374 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 NCBP2P52298 156 aaKnown RBP eCLIP4□□□□□ -1.77
CKS1B-204ENST00000471245 SNRPD2P62316 118 aaKnown RBP4□□□□□ -1.77
CKS1B-204ENST00000471245 PSPHP78330 225 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF117Q03924 483 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 C2orf54Q08AI8 447 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 C2orf80Q0P641 193 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 FOXF1Q12946 379 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 NAB1Q13506 487 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 UAP1Q16222 522 aaPredicted RBP4□□□□□ -1.77
CKS1B-204ENST00000471245 NDUFAF6Q330K2 333 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF678Q5SXM1 525 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 CCNJQ5T5M9 372 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 RSBN1Q5VWQ0 802 aaPredicted RBP4□□□□□ -1.77
CKS1B-204ENST00000471245 ANKRD26P1Q6NSI1 321 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 FAM220AQ7Z4H9 259 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 TMEM179BQ7Z7N9 219 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF100Q8IYN0 542 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 NKAPP1Q8N9T2 125 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 DCAKDQ8WVC6 231 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 CPNE4Q96A23 557 aaPredicted RBP4□□□□□ -1.77
CKS1B-204ENST00000471245 CIDECQ96AQ7 238 aaPredicted RBP4□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF382Q96SR6 550 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 SUCNR1Q9BXA5 334 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 TBL1XR1Q9BZK7 514 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 C20orf85Q9H1P6 137 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 TAS2R7Q9NYW3 318 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 KIF25Q9UIL4 384 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 RHBDD3Q9Y3P4 386 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 SAR1BQ9Y6B6 198 aa4□□□□□ -1.77
CKS1B-204ENST00000471245 GNG14A0A1W2PPG7 69 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 CIB4A0PJX0 185 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 LSM1O15116 133 aaKnown RBP3.99□□□□□ -1.77
CKS1B-204ENST00000471245 SMIM24O75264 130 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF780AO75290 641 aaPredicted RBP3.99□□□□□ -1.77
CKS1B-204ENST00000471245 OR7A10O76100 309 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 MSMBP08118 114 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 RBP1P09455 135 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 TBPP20226 339 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 ME2P23368 584 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 RRM2P31350 389 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 MPIP34949 423 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 PPOXP50336 477 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 IDH3GP51553 393 aaPredicted RBP3.99□□□□□ -1.77
CKS1B-204ENST00000471245 GPM6AP51674 278 aa3.99□□□□□ -1.77
CKS1B-204ENST00000471245 GNG11P61952 73 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms