RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SIGLEC12Q96PQ1 595 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 EIF5A2Q9GZV4 153 aaKnown RBP11.71□□□□□ -0.53
BRCA1-209ENST00000470026 CRIM1Q9NZV1 1036 aa11.71□□□□□ -0.53
BRCA1-209ENST00000470026 SLC22A20A6NK97 555 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 PCP4L1A6NKN8 68 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 C1orf196B1AJZ1 125 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 PRH1P02810 166 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 SCTP09683 121 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 PPP1CCP36873 323 aaKnown RBP11.71□□□□□ -0.54
BRCA1-209ENST00000470026 AKR1C3P42330 323 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 POLR2GP62487 172 aaKnown RBP eCLIP11.71□□□□□ -0.54
BRCA1-209ENST00000470026 ARF1P84077 181 aaKnown RBP11.71□□□□□ -0.54
BRCA1-209ENST00000470026 SLC23A3Q6PIS1 610 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF818PQ6ZRF7 136 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF695Q8IW36 515 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF561Q8N587 486 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 PLPPR1Q8TBJ4 325 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 IL22RA2Q969J5 263 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 HS3ST6Q96QI5 342 aa11.71□□□□□ -0.54
BRCA1-209ENST00000470026 PAPOLGQ9BWT3 736 aaKnown RBP11.71□□□□□ -0.54
BRCA1-209ENST00000470026 NOSIPQ9Y314 301 aaKnown RBP11.71□□□□□ -0.54
BRCA1-209ENST00000470026 UBE2J1Q9Y385 318 aaPredicted RBP11.71□□□□□ -0.54
BRCA1-209ENST00000470026 TRBV6-6A0A0A6YYG2 114 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 IGKV1D-13A0A0B4J2D9 117 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF724A8MTY0 619 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF732B4DXR9 585 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 PROB1E7EW31 1015 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 UBE2CO00762 179 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 MRPL33O75394 65 aaKnown RBP11.7□□□□□ -0.54
BRCA1-209ENST00000470026 SNRNP70P08621 437 aaKnown RBP11.7□□□□□ -0.54
BRCA1-209ENST00000470026 CTXN2P0C2S0 81 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 IGKV1-13P0DP09 117 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 ATP6V0CP27449 155 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 RNPS1Q15287 305 aaKnown RBP11.7□□□□□ -0.54
BRCA1-209ENST00000470026 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 TMEM182Q6ZP80 229 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-209ENST00000470026 OR1J1Q8NGS3 322 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 SLAMF9Q96A28 289 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 SLC25A31Q9H0C2 315 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 ATP23Q9Y6H3 246 aa11.7□□□□□ -0.54
BRCA1-209ENST00000470026 IGKV1-6A0A0C4DH72 117 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 KIR2DS1A0A191URI9 304 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 EIF3GO75821 320 aaKnown RBP eCLIP11.69□□□□□ -0.54
BRCA1-209ENST00000470026 ACAA1P09110 424 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-209ENST00000470026 WNT2P09544 360 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 VDAC1P21796 283 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 KIR2DS4P43632 304 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 LHX2P50458 406 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 RAB1AP62820 205 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 BAXQ07812 192 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 CLINT1Q14677 625 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 KIR2DS1Q14954 304 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 DCAF12Q5T6F0 453 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 GAPTQ8N292 157 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 FAM213BQ8TBF2 198 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 CT55Q8WUE5 264 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 YPEL4Q96NS1 127 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 IFT22Q9H7X7 185 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 KCNJ16Q9NPI9 418 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 MTCH1Q9NZJ7 389 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 BOKQ9UMX3 212 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-209ENST00000470026 BTBD17A6NE02 478 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 TMEM50AO95807 157 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 CEACAM1P13688 526 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 HAAOP46952 286 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 B2MP61769 119 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 SNRPEP62304 92 aaKnown RBP11.69□□□□□ -0.54
BRCA1-209ENST00000470026 CXorf66Q5JRM2 361 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-209ENST00000470026 PCSK4Q6UW60 755 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 TIPARPQ7Z3E1 657 aaKnown RBP11.69□□□□□ -0.54
BRCA1-209ENST00000470026 LINC00596Q86U02 117 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 ZDHHC23Q8IYP9 409 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF565Q8N9K5 539 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 OR5D13Q8NGL4 314 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 APOBEC3DQ96AK3 386 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-209ENST00000470026 RIMS4Q9H426 269 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-209ENST00000470026 GLRX2Q9NS18 164 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 FBXO7Q9Y3I1 522 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 KMT2EQ8IZD2 1858 aa11.69□□□□□ -0.54
BRCA1-209ENST00000470026 H0Y980 276 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 ADAM20O43506 726 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 IGHV3-9P01782 118 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 ACP1P24666 158 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 SULT1A1P50225 295 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 CLDN18P56856 261 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 AKIRIN2Q53H80 203 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF880Q6PDB4 577 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 C6orf15Q6UXA7 325 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-209ENST00000470026 C5orf24Q7Z6I8 188 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 MKXQ8IYA7 352 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 OR5A2Q8NGI9 324 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 OR2G3Q8NGZ4 309 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 PRRG4Q9BZD6 226 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 SPRY4Q9C004 299 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF703Q9H7S9 590 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-209ENST00000470026 A0A1W2PPH5 198 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF503-AS2A6NEH8 195 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 A6NLC8 198 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 M0R036 132 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms