RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 CCDC54Q8NEL0 328 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 OR1F12Q8NHA8 337 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 BORCS8Q96FH0 119 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 PLEKHF2Q9H8W4 249 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 PARPBPQ9NWS1 579 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 CHD3Q12873 2000 aaKnown RBP8.84□□□□□ -0.99
SMC4-210ENST00000469762 CCDC163A0A0D9SF12 145 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 LY86O95711 162 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 SCTP09683 121 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 CEACAM1P13688 526 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 ZNF32P17041 273 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 GLIPR1P48060 266 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 PSG4Q00888 419 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 ZNF154Q13106 437 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 GNMTQ14749 295 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 TMEM211Q6ICI0 200 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 SSX7Q7RTT5 188 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 GPR137CQ8N3F9 429 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 GPR61Q9BZJ8 451 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 CRLF2Q9HC73 371 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 IL36RNQ9UBH0 155 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 SLC7A11Q9UPY5 501 aa8.84□□□□□ -0.99
SMC4-210ENST00000469762 NPIPA2E9PIF3 369 aa8.83□□□□□ -1
SMC4-210ENST00000469762 NPIPA3F8WFD2 350 aa8.83□□□□□ -1
SMC4-210ENST00000469762 HSPB1P04792 205 aaKnown RBP8.83□□□□□ -1
SMC4-210ENST00000469762 TCN2P20062 427 aa8.83□□□□□ -1
SMC4-210ENST00000469762 RAB2AP61019 212 aa8.83□□□□□ -1
SMC4-210ENST00000469762 ZNF266Q14584 549 aa8.83□□□□□ -1
SMC4-210ENST00000469762 TMEM217Q8N7C4 229 aa8.83□□□□□ -1
SMC4-210ENST00000469762 ZNF610Q8N9Z0 462 aa8.83□□□□□ -1
SMC4-210ENST00000469762 DEFB126Q9BYW3 111 aa8.83□□□□□ -1
SMC4-210ENST00000469762 WNT5BQ9H1J7 359 aa8.83□□□□□ -1
SMC4-210ENST00000469762 LCATP04180 440 aa8.83□□□□□ -1
SMC4-210ENST00000469762 FKBP2P26885 142 aaKnown RBP8.83□□□□□ -1
SMC4-210ENST00000469762 GUCA1AP43080 201 aaPredicted RBP8.83□□□□□ -1
SMC4-210ENST00000469762 CEBPGP53567 150 aa8.83□□□□□ -1
SMC4-210ENST00000469762 B3GALT5-AS1P59052 145 aa8.83□□□□□ -1
SMC4-210ENST00000469762 UBE2KP61086 200 aa8.83□□□□□ -1
SMC4-210ENST00000469762 CNN3Q15417 329 aaKnown RBP8.83□□□□□ -1
SMC4-210ENST00000469762 OR8B8Q15620 311 aa8.83□□□□□ -1
SMC4-210ENST00000469762 GAPTQ8N292 157 aa8.83□□□□□ -1
SMC4-210ENST00000469762 Q8NFD4 153 aa8.83□□□□□ -1
SMC4-210ENST00000469762 TMEM38BQ9NVV0 291 aa8.83□□□□□ -1
SMC4-210ENST00000469762 WSB1Q9Y6I7 421 aa8.83□□□□□ -1
SMC4-210ENST00000469762 SLC22A20A6NK97 555 aa8.83□□□□□ -1
SMC4-210ENST00000469762 B4GALT1P15291 398 aa8.83□□□□□ -1
SMC4-210ENST00000469762 ZNF726P1Q15940 193 aa8.83□□□□□ -1
SMC4-210ENST00000469762 KHDC3LQ587J8 217 aa8.83□□□□□ -1
SMC4-210ENST00000469762 GUSBP11Q6P575 273 aa8.83□□□□□ -1
SMC4-210ENST00000469762 SLC23A3Q6PIS1 610 aa8.83□□□□□ -1
SMC4-210ENST00000469762 FRZBQ92765 325 aa8.83□□□□□ -1
SMC4-210ENST00000469762 C14orf144Q96I85 54 aa8.83□□□□□ -1
SMC4-210ENST00000469762 RHOVQ96L33 236 aa8.83□□□□□ -1
SMC4-210ENST00000469762 SSX3Q99909 188 aa8.83□□□□□ -1
SMC4-210ENST00000469762 VSIRQ9H7M9 311 aa8.83□□□□□ -1
SMC4-210ENST00000469762 GAR1Q9NY12 217 aaKnown RBP8.83□□□□□ -1
SMC4-210ENST00000469762 IGHV5-10-1A0A0J9YXX1 117 aa8.82□□□□□ -1
SMC4-210ENST00000469762 C3orf80F5H4A9 247 aa8.82□□□□□ -1
SMC4-210ENST00000469762 NAPSAO96009 420 aa8.82□□□□□ -1
SMC4-210ENST00000469762 RNPS1Q15287 305 aaKnown RBP8.82□□□□□ -1
SMC4-210ENST00000469762 OR10D4PQ8NGN7 298 aa8.82□□□□□ -1
SMC4-210ENST00000469762 TNRC6BQ9UPQ9 1833 aaKnown RBP8.82□□□□□ -1
SMC4-210ENST00000469762 KIAA2026Q5HYC2 2103 aa8.82□□□□□ -1
SMC4-210ENST00000469762 ZNF716A6NP11 495 aa8.82□□□□□ -1
SMC4-210ENST00000469762 YKT6O15498 198 aa8.82□□□□□ -1
SMC4-210ENST00000469762 CHST1O43916 411 aa8.82□□□□□ -1
SMC4-210ENST00000469762 TUSC2O75896 110 aa8.82□□□□□ -1
SMC4-210ENST00000469762 CST2P09228 141 aa8.82□□□□□ -1
SMC4-210ENST00000469762 FUT3P21217 361 aa8.82□□□□□ -1
SMC4-210ENST00000469762 UCP1P25874 307 aa8.82□□□□□ -1
SMC4-210ENST00000469762 ZNF674Q2M3X9 581 aa8.82□□□□□ -1
SMC4-210ENST00000469762 RAET1LQ5VY80 246 aa8.82□□□□□ -1
SMC4-210ENST00000469762 Q6ZS49 121 aa8.82□□□□□ -1
SMC4-210ENST00000469762 CCDC71LQ8N9Z2 235 aa8.82□□□□□ -1
SMC4-210ENST00000469762 INTS12Q96CB8 462 aaKnown RBP8.82□□□□□ -1
SMC4-210ENST00000469762 ALKBH3Q96Q83 286 aaPredicted RBP8.82□□□□□ -1
SMC4-210ENST00000469762 DKKL1Q9UK85 242 aa8.82□□□□□ -1
SMC4-210ENST00000469762 PTRH2Q9Y3E5 179 aaKnown RBP8.82□□□□□ -1
SMC4-210ENST00000469762 A0A0G2JMM0 328 aa8.82□□□□□ -1
SMC4-210ENST00000469762 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.82□□□□□ -1
SMC4-210ENST00000469762 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.82□□□□□ -1
SMC4-210ENST00000469762 A0A1W2PPB8 328 aa8.82□□□□□ -1
SMC4-210ENST00000469762 A0A1W2PRS3 328 aa8.82□□□□□ -1
SMC4-210ENST00000469762 KIR3DP1A8MWS1 328 aa8.82□□□□□ -1
SMC4-210ENST00000469762 SEC14L6B5MCN3 397 aa8.82□□□□□ -1
SMC4-210ENST00000469762 TOX3O15405 576 aaPredicted RBP8.82□□□□□ -1
SMC4-210ENST00000469762 CYB5BO43169 146 aa8.82□□□□□ -1
SMC4-210ENST00000469762 VAMP5O95183 116 aa8.82□□□□□ -1
SMC4-210ENST00000469762 UMODP07911 640 aa8.82□□□□□ -1
SMC4-210ENST00000469762 NR2C1P13056 603 aa8.82□□□□□ -1
SMC4-210ENST00000469762 PDZD11Q5EBL8 140 aa8.82□□□□□ -1
SMC4-210ENST00000469762 ZNF611Q8N823 705 aa8.82□□□□□ -1
SMC4-210ENST00000469762 Q9N2K0 584 aa8.82□□□□□ -1
SMC4-210ENST00000469762 A0A087WZY1 265 aa8.81□□□□□ -1
SMC4-210ENST00000469762 LOC102723971A0A1B0GUV8 181 aa8.81□□□□□ -1
SMC4-210ENST00000469762 BTBD17A6NE02 478 aa8.81□□□□□ -1
SMC4-210ENST00000469762 TRGC1P0CF51 173 aa8.81□□□□□ -1
SMC4-210ENST00000469762 HIST1H1BP16401 226 aaKnown RBP8.81□□□□□ -1
SMC4-210ENST00000469762 CLDN15P56746 228 aa8.81□□□□□ -1
SMC4-210ENST00000469762 HERV-K104P61576 105 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms