RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 PPA2Q9H2U2 334 aa14.62□□□□□ -0.07
RPL39-202ENST00000468844 SEBOXQ9HB31 216 aaPredicted RBP14.62□□□□□ -0.07
RPL39-202ENST00000468844 ZNF701Q9NV72 531 aaPredicted RBP14.62□□□□□ -0.07
RPL39-202ENST00000468844 DUX4Q9UBX2 424 aa14.62□□□□□ -0.07
RPL39-202ENST00000468844 KLK11Q9UBX7 282 aa14.62□□□□□ -0.07
RPL39-202ENST00000468844 BAHCC1Q9P281 2608 aa14.62□□□□□ -0.07
RPL39-202ENST00000468844 ZANQ9Y493 2812 aa14.61□□□□□ -0.07
RPL39-202ENST00000468844 TMEM82A0PJX8 343 aa14.61□□□□□ -0.07
RPL39-202ENST00000468844 H3BUI4 141 aa14.61□□□□□ -0.07
RPL39-202ENST00000468844 GSTZ1O43708 216 aaPredicted RBP14.61□□□□□ -0.07
RPL39-202ENST00000468844 SSX5O60225 188 aa14.61□□□□□ -0.07
RPL39-202ENST00000468844 CD3GP09693 182 aa14.61□□□□□ -0.07
RPL39-202ENST00000468844 ZNF788Q6ZQV5 615 aa14.61□□□□□ -0.07
RPL39-202ENST00000468844 ZNF525Q8N782 197 aa14.61□□□□□ -0.07
RPL39-202ENST00000468844 ASCC1Q8N9N2 400 aaKnown RBP14.61□□□□□ -0.07
RPL39-202ENST00000468844 ZNRF1Q8ND25 227 aa14.61□□□□□ -0.07
RPL39-202ENST00000468844 THAP7Q9BT49 309 aaPredicted RBP14.61□□□□□ -0.07
RPL39-202ENST00000468844 MCRIP1C9JLW8 97 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 SSX4O60224 188 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 IGHV2-70P01814 119 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 IL7P13232 177 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 SELLP14151 372 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 GNG2P59768 71 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 ARFRP1Q13795 201 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 ATXN7L3Q14CW9 347 aaPredicted RBP14.6□□□□□ -0.07
RPL39-202ENST00000468844 NEK7Q8TDX7 302 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 FCAMRQ8WWV6 532 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 SDSLQ96GA7 329 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 GAFA1Q96PS6 74 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 CCL13Q99616 98 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 TMEM246Q9BRR3 403 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 RBMX2Q9Y388 322 aaKnown RBP14.6□□□□□ -0.07
RPL39-202ENST00000468844 TNFRSF13BO14836 293 aaPredicted RBP14.6□□□□□ -0.07
RPL39-202ENST00000468844 TMPRSS2O15393 492 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 CA11O75493 328 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 FSTL3O95633 263 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 GLAP06280 429 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 LPLP06858 475 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 OR3A1P47881 315 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 RBM39Q14498 530 aaKnown RBP14.6□□□□□ -0.07
RPL39-202ENST00000468844 KCNJ8Q15842 424 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 AVPI1Q5T686 147 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 ATPAF1Q5TC12 328 aaPredicted RBP14.6□□□□□ -0.07
RPL39-202ENST00000468844 Q6ZPA2 131 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 PEG10Q86TG7 708 aaKnown RBP14.6□□□□□ -0.07
RPL39-202ENST00000468844 FAM216BQ8N7L0 139 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 SCPEP1Q9HB40 452 aa14.6□□□□□ -0.07
RPL39-202ENST00000468844 NOTCH2Q04721 2471 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 ITPR3Q14573 2671 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 SULT1C2O00338 296 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 PPIHO43447 177 aaKnown RBP14.59□□□□□ -0.07
RPL39-202ENST00000468844 PAX1P15863 534 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 MDH2P40926 338 aaKnown RBP14.59□□□□□ -0.07
RPL39-202ENST00000468844 ATP5J2P56134 94 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 TMEM33P57088 247 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 NRARPQ7Z6K4 114 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 TRAPPC6BQ86SZ2 158 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 ZNF561Q8N587 486 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 GVQW1Q8N7I0 195 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 OR4S1Q8NGB4 309 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 PLPPR1Q8TBJ4 325 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 CMSS1Q9BQ75 279 aaKnown RBP14.59□□□□□ -0.07
RPL39-202ENST00000468844 DNTTIP1Q9H147 329 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 ZNF665Q9H7R5 613 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 MTFP1Q9UDX5 166 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 CREBBPQ92793 2442 aa14.59□□□□□ -0.07
RPL39-202ENST00000468844 K7N7A8 449 aa14.58□□□□□ -0.07
RPL39-202ENST00000468844 ORC5O43913 435 aa14.58□□□□□ -0.07
RPL39-202ENST00000468844 SHEQ5VZ18 495 aa14.58□□□□□ -0.07
RPL39-202ENST00000468844 LYPD2Q6UXB3 125 aa14.58□□□□□ -0.07
RPL39-202ENST00000468844 PERPQ96FX8 193 aa14.58□□□□□ -0.07
RPL39-202ENST00000468844 ZNF230Q9UIE0 474 aaPredicted RBP14.58□□□□□ -0.07
RPL39-202ENST00000468844 A0A1W2PQ09 198 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 SIGLEC5O15389 551 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 NAPSAO96009 420 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 CSN2P05814 226 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 FCER2P06734 321 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 GDNFP39905 211 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 IL13RA1P78552 427 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 SNX22Q96L94 193 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 MYOZ1Q9NP98 299 aaPredicted RBP14.58□□□□□ -0.08
RPL39-202ENST00000468844 C12orf4Q9NQ89 552 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 ING3Q9NXR8 418 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 ITGB1BP2Q9UKP3 347 aa14.58□□□□□ -0.08
RPL39-202ENST00000468844 FCN3O75636 299 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 TK1P04183 234 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 RFX2P48378 723 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 AESQ08117 197 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 GRK1Q15835 563 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 TRIQKQ629K1 86 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 GAPTQ8N292 157 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 RAB1CQ92928 201 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 TIMD4Q96H15 378 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 COQ2Q96H96 371 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 GSX2Q9BZM3 304 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 KAAG1Q9UBP8 84 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 CTSZQ9UBR2 303 aa14.57□□□□□ -0.08
RPL39-202ENST00000468844 PRRC2AP48634 2157 aaKnown RBP14.57□□□□□ -0.08
RPL39-202ENST00000468844 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.57□□□□□ -0.08
RPL39-202ENST00000468844 ADAM20O43506 726 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms