RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 ETV1P50549 477 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 LTC4SQ16873 150 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 C17orf58Q2M2W7 97 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 HLA-DRB5Q30154 266 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 OR2G6Q5TZ20 316 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 XAF1Q6GPH4 301 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 TMPRSS11AQ6ZMR5 421 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 NDUFA11Q86Y39 141 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 PXT1Q8NFP0 134 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 CNIH3Q8TBE1 160 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 RGP1Q92546 391 aaPredicted RBP17.45■□□□□ 0.38
TTC28-204ENST00000468807 CREB3L1Q96BA8 519 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 SLC25A33Q9BSK2 321 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 WNT10AQ9GZT5 417 aa17.45■□□□□ 0.38
TTC28-204ENST00000468807 FGF20Q9NP95 211 aaPredicted RBP17.45■□□□□ 0.38
TTC28-204ENST00000468807 A0A1W2PRX2 142 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 BUB1B-PAK6H3BSN5 160 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 WBP4O75554 376 aaKnown RBP17.44■□□□□ 0.38
TTC28-204ENST00000468807 HTR3BO95264 441 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 CD34P28906 385 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 PIGYQ3MUY2 71 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 TPTE2P1Q5T6R2 138 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 RPL22L1Q6P5R6 122 aaKnown RBP17.44■□□□□ 0.38
TTC28-204ENST00000468807 C16orf82Q7Z2V1 217 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 ZNF565Q8N9K5 539 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 OR4F17Q8NGA8 305 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 OR51T1Q8NGJ9 327 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 OR4F4Q96R69 305 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 BARHL1Q9BZE3 327 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 KIF25Q9UIL4 384 aa17.44■□□□□ 0.38
TTC28-204ENST00000468807 NOTCH3Q9UM47 2321 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 TRAV24A0A0B4J272 114 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 KBTBD11-OT1A0A1B0GTJ5 212 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 CLIC3O95833 236 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 IGHV3-7P01780 117 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 MNDAP41218 407 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 PPP3R1P63098 170 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 BEAN1Q3B7T3 259 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 ABCA11PQ4W5N1 156 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 UTF1Q5T230 341 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 ELP2Q6IA86 826 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 OR5AU1Q8NGC0 362 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 OR13A1Q8NGR1 328 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 CYGBQ8WWM9 190 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 LEAP2Q969E1 77 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 TMEM106AQ96A25 262 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 KIRREL1Q96J84 757 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 LIN7BQ9HAP6 207 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 CALYQ9NYX4 217 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 ING4Q9UNL4 249 aa17.43■□□□□ 0.38
TTC28-204ENST00000468807 CDRT1O95170 752 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 PRB2P02812 416 aaPredicted RBP17.42■□□□□ 0.38
TTC28-204ENST00000468807 LPLP06858 475 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 MYL12AP19105 171 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 DCKP27707 260 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 C21orf33P30042 268 aaPredicted RBP17.42■□□□□ 0.38
TTC28-204ENST00000468807 IL13RA2Q14627 380 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 LRRC36Q1X8D7 754 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 CCDC58Q4VC31 144 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 CCDC144NLQ6NUI1 221 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 ZNF529Q6P280 563 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 CENPVQ7Z7K6 275 aaPredicted RBP17.42■□□□□ 0.38
TTC28-204ENST00000468807 OR9G1Q8NH87 305 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 MRGPRDQ8TDS7 321 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 WIPF2Q8TF74 440 aaPredicted RBP17.42■□□□□ 0.38
TTC28-204ENST00000468807 RDH12Q96NR8 316 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 OCSTAMPQ9BR26 566 aa17.42■□□□□ 0.38
TTC28-204ENST00000468807 IRGMA1A4Y4 181 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 SH2D7A6NKC9 451 aaPredicted RBP17.41■□□□□ 0.38
TTC28-204ENST00000468807 FBLN7Q53RD9 439 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 C9orf152Q5JTZ5 239 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 DDI2Q5TDH0 399 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 SAMD5Q5TGI4 173 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 RFESDQ8TAC1 157 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 TOMM40LQ969M1 308 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 RPEQ96AT9 228 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 RBM14Q96PK6 669 aaKnown RBP17.41■□□□□ 0.38
TTC28-204ENST00000468807 S100A13Q99584 98 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 METTL9Q9H1A3 318 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 TMEM138Q9NPI0 162 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 IDI2-AS1Q9NZ38 188 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 ST3GAL6Q9Y274 331 aa17.41■□□□□ 0.38
TTC28-204ENST00000468807 AMMECR1Q9Y4X0 333 aaPredicted RBP17.41■□□□□ 0.38
TTC28-204ENST00000468807 A0A087X0M5 115 aa17.4■□□□□ 0.38
TTC28-204ENST00000468807 A0A1B0GX30 115 aa17.4■□□□□ 0.38
TTC28-204ENST00000468807 XPNPEP2O43895 674 aa17.4■□□□□ 0.38
TTC28-204ENST00000468807 OR7C1O76099 320 aaPredicted RBP17.4■□□□□ 0.38
TTC28-204ENST00000468807 OR2F2O95006 317 aa17.4■□□□□ 0.38
TTC28-204ENST00000468807 CSTBP04080 98 aaKnown RBP17.4■□□□□ 0.38
TTC28-204ENST00000468807 ZNF93P35789 620 aaPredicted RBP17.4■□□□□ 0.38
TTC28-204ENST00000468807 GNG10P50151 68 aa17.4■□□□□ 0.38
TTC28-204ENST00000468807 OXLD1Q5BKU9 147 aa17.4■□□□□ 0.38
TTC28-204ENST00000468807 RSBN1Q5VWQ0 802 aaPredicted RBP17.4■□□□□ 0.38
TTC28-204ENST00000468807 OR13C5Q8NGS8 318 aa17.4■□□□□ 0.38
TTC28-204ENST00000468807 PLPPR1Q8TBJ4 325 aa17.4■□□□□ 0.38
TTC28-204ENST00000468807 ORAI1Q96D31 301 aa17.4■□□□□ 0.38
TTC28-204ENST00000468807 CHCHD3Q9NX63 227 aaKnown RBP17.4■□□□□ 0.38
TTC28-204ENST00000468807 BABAM2Q9NXR7 383 aa17.4■□□□□ 0.38
TTC28-204ENST00000468807 SIRT4Q9Y6E7 314 aaPredicted RBP17.4■□□□□ 0.38
TTC28-204ENST00000468807 TRAV39A0A0B4J263 110 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms