RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 NPY4RP50391 375 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 METTL11BQ5VVY1 283 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 OR52B4Q8NGK2 314 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 OR6F1Q8NGZ6 308 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 PLPPR1Q8TBJ4 325 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 DIRC2Q96SL1 478 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 NECAP2Q9NVZ3 263 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 RASL12Q9NYN1 266 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 B8ZZF3 427 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 LHBP01229 141 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 ADH4P08319 380 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 OR5H8P0DN80 308 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 GRK1Q15835 563 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 AADACL3Q5VUY0 350 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 LHFPL1Q86WI0 220 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 TGIF2LYQ8IUE0 185 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 MED28Q9H204 178 aa17.3■□□□□ 0.36
TMEM53-207ENST00000468117 RAI1Q7Z5J4 1906 aaPredicted RBP17.29■□□□□ 0.36
TMEM53-207ENST00000468117 IGHV3OR15-7A0A075B7D8 119 aa17.29■□□□□ 0.36
TMEM53-207ENST00000468117 IL5P05113 134 aa17.29■□□□□ 0.36
TMEM53-207ENST00000468117 LMO1P25800 156 aa17.29■□□□□ 0.36
TMEM53-207ENST00000468117 MST1LQ2TV78 715 aa17.29■□□□□ 0.36
TMEM53-207ENST00000468117 FAM201AQ5SY85 155 aa17.29■□□□□ 0.36
TMEM53-207ENST00000468117 RIMS4Q9H426 269 aaPredicted RBP17.29■□□□□ 0.36
TMEM53-207ENST00000468117 DNAJB11Q9UBS4 358 aa17.29■□□□□ 0.36
TMEM53-207ENST00000468117 METRNQ9UJH8 293 aa17.29■□□□□ 0.36
TMEM53-207ENST00000468117 ZNF221Q9UK13 617 aa17.29■□□□□ 0.36
TMEM53-207ENST00000468117 PPP1R3CQ9UQK1 317 aa17.29■□□□□ 0.36
TMEM53-207ENST00000468117 DCHS2Q6V1P9 2916 aa17.29■□□□□ 0.36
TMEM53-207ENST00000468117 OR5H14A6NHG9 310 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 CD55P08174 381 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 PSG2P11465 335 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 MDH2P40926 338 aaKnown RBP17.28■□□□□ 0.36
TMEM53-207ENST00000468117 CD83Q01151 205 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 FCN2Q15485 313 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 ZNF672Q499Z4 452 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-207ENST00000468117 Q6ZS49 121 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 ZDHHC22Q8N966 263 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 ST6GAL2Q96JF0 529 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 ZNF2Q9BSG1 426 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-207ENST00000468117 TMPRSS13Q9BYE2 586 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 LIME1Q9H400 295 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 DYNLRB1Q9NP97 96 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 RNF7Q9UBF6 113 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 ZNF69Q9UC07 566 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 WIPI2Q9Y4P8 454 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 NPTNQ9Y639 398 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 COL12A1Q99715 3063 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 SSNA1O43805 119 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 CYB5R3P00387 301 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-207ENST00000468117 RCC1P18754 421 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-207ENST00000468117 TNFRSF1AP19438 455 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 COL10A1Q03692 680 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 BAMBIQ13145 260 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 EFNB3Q15768 340 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 C4orf46Q504U0 113 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 IGSF11Q5DX21 431 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 SHEQ5VZ18 495 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 ZNF660Q6AZW8 331 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-207ENST00000468117 ZNF497Q6ZNH5 498 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 CD177Q8N6Q3 437 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 CCDC107Q8WV48 283 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 MED30Q96HR3 178 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 DHRS9Q9BPW9 319 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 TMEM204Q9BSN7 226 aa17.28■□□□□ 0.36
TMEM53-207ENST00000468117 SPTAN1Q13813 2472 aaKnown RBP17.28■□□□□ 0.36
TMEM53-207ENST00000468117 USP9XQ93008 2570 aaPredicted RBP17.27■□□□□ 0.36
TMEM53-207ENST00000468117 IGKV1D-17A0A075B6S4 117 aa17.27■□□□□ 0.36
TMEM53-207ENST00000468117 B9A039 149 aa17.27■□□□□ 0.36
TMEM53-207ENST00000468117 SCTP09683 121 aa17.27■□□□□ 0.36
TMEM53-207ENST00000468117 OR4E1P0C645 316 aa17.27■□□□□ 0.36
TMEM53-207ENST00000468117 PRDX2P32119 198 aa17.27■□□□□ 0.36
TMEM53-207ENST00000468117 SRSF7Q16629 238 aaKnown RBP eCLIP17.27■□□□□ 0.36
TMEM53-207ENST00000468117 ZNF626Q68DY1 528 aa17.27■□□□□ 0.36
TMEM53-207ENST00000468117 ERGIC1Q969X5 290 aa17.27■□□□□ 0.36
TMEM53-207ENST00000468117 ALX4Q9H161 411 aaPredicted RBP17.27■□□□□ 0.36
TMEM53-207ENST00000468117 GPN1Q9HCN4 374 aaPredicted RBP17.27■□□□□ 0.36
TMEM53-207ENST00000468117 RANGRFQ9HD47 186 aaPredicted RBP17.27■□□□□ 0.36
TMEM53-207ENST00000468117 DECR2Q9NUI1 292 aa17.27■□□□□ 0.36
TMEM53-207ENST00000468117 DCAF16Q9NXF7 216 aa17.27■□□□□ 0.36
TMEM53-207ENST00000468117 TRBV6-6A0A0A6YYG2 114 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 TRAV39A0A0B4J263 110 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 IFNL4K9M1U5 179 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 CREBL2O60519 120 aaPredicted RBP17.26■□□□□ 0.35
TMEM53-207ENST00000468117 CD80P33681 288 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 TESK1Q15569 626 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 FAM209AQ5JX71 171 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 MUC15Q8N387 334 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 OR11H7Q8NGC8 314 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 Q8TCH9 128 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 SAP30LQ9HAJ7 183 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 CEACAM18A8MTB9 384 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 C19orf84I3L1E1 186 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 FABP7O15540 132 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 CD276Q5ZPR3 534 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 ZNF880Q6PDB4 577 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 FAM90A1Q86YD7 464 aa17.26■□□□□ 0.35
TMEM53-207ENST00000468117 ASCC1Q8N9N2 400 aaKnown RBP17.26■□□□□ 0.35
TMEM53-207ENST00000468117 ADAD2Q8NCV1 583 aaKnown RBP17.26■□□□□ 0.35
TMEM53-207ENST00000468117 OR11L1Q8NGX0 322 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms