RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 PPYP01298 95 aa12.67□□□□□ -0.38
PRPF38B-204ENST00000467302 PRH1P02810 166 aa12.67□□□□□ -0.38
PRPF38B-204ENST00000467302 FUT3P21217 361 aa12.67□□□□□ -0.38
PRPF38B-204ENST00000467302 EWSR1Q01844 656 aaKnown RBP eCLIP12.67□□□□□ -0.38
PRPF38B-204ENST00000467302 TGIF1Q15583 401 aa12.67□□□□□ -0.38
PRPF38B-204ENST00000467302 NAXEQ8NCW5 288 aa12.67□□□□□ -0.38
PRPF38B-204ENST00000467302 SLC7A11Q9UPY5 501 aa12.67□□□□□ -0.38
PRPF38B-204ENST00000467302 C3orf85A0A1B0GTC6 90 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 SPAARA0A1B0GVQ0 90 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 A0A1W2PPH5 198 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 M0R036 132 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 S100A8P05109 93 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 DAOP14920 347 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 NOVA1P51513 510 aaKnown RBP12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 HERV-K104P61576 105 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 GNMTQ14749 295 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 RHEBQ15382 184 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 LFNGQ8NES3 379 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 Q8NFD4 153 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 POM121Q96HA1 1249 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 FOXB1Q99853 325 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 PBDC1Q9BVG4 233 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 TMEM222Q9H0R3 208 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 ZNF816-ZNF321PA0A0X1KG74 233 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 A0A1W2PPE3 182 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 NKX2-6A6NCS4 301 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 CDRT15L2A8MXV6 281 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 TRDCB7Z8K6 153 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 CYTIPO60759 359 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 SMIM6P0DI80 62 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 RAB5AP20339 215 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 GNRHRP30968 328 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 PPP1CCP36873 323 aaKnown RBP12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 SRPXP78539 464 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 IGSF11Q5DX21 431 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 RIPPLY2Q5TAB7 128 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 PLCXD3Q63HM9 321 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 TMEM182Q6ZP80 229 aaPredicted RBP12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 Q6ZS49 121 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 CALHM1Q8IU99 346 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 FAM185AQ8N0U4 392 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 OR2C3Q8N628 320 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 OR1J1Q8NGS3 322 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 SPSB4Q96A44 273 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 ZNF845Q96IR2 970 aaPredicted RBP12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 TMEM56Q96MV1 263 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 TECTBQ96PL2 329 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 C20orf24Q9BUV8 137 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 TTTY12Q9BZ98 90 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 KLF13Q9Y2Y9 288 aaPredicted RBP12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 FBXO7Q9Y3I1 522 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 TMEM56-RWDD3S4R434 201 aa12.66□□□□□ -0.38
PRPF38B-204ENST00000467302 EDN3P14138 238 aa12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 SULT1A1P50225 295 aa12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 PLGLB1Q02325 96 aa12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 CEACAM16Q2WEN9 425 aa12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 RBMS3Q6XE24 437 aaKnown RBP12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 MEX3BQ6ZN04 569 aaKnown RBP12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 PIGCQ92535 297 aa12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 MALSU1Q96EH3 234 aa12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 SMDT1Q9H4I9 107 aa12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 ZNF442Q9H7R0 627 aa12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 SEBOXQ9HB31 216 aaPredicted RBP12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 KCNJ16Q9NPI9 418 aa12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 METTL1Q9UBP6 276 aaKnown RBP12.65□□□□□ -0.38
PRPF38B-204ENST00000467302 FREM2Q5SZK8 3169 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 MED19A0JLT2 244 aaPredicted RBP12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 IGSF23A1L1A6 192 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM24AA6NFZ4 105 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM166BA8MTA8 275 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 ZNF587BE7ETH6 402 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 IGHV2-5P01817 119 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 S100A6P06703 90 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 CELA3AP09093 270 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 MAS1LP35410 378 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 MAGEA5P43359 124 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 NPBWR2P48146 333 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 ASCL1P50553 236 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 PCBD1P61457 104 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 TCF15Q12870 199 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 KRBOX4Q5JUW0 171 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 ZNF611Q8N823 705 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 MDS2Q8NDY4 140 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 LILRB1Q8NHL6 650 aaPredicted RBP12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM213BQ8TBF2 198 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 C1QTNF5Q9BXJ0 243 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 hCG_1809904A0A1W2PP81 198 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 A0A1W2PR64 198 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 A0A1W2PRV1 198 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 PITX3O75364 302 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 OR7C1O76099 320 aaPredicted RBP12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 SP1P08047 785 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 MMP7P09237 267 aaPredicted RBP12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 LHX2P50458 406 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 RND3P61587 244 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 SRYQ05066 204 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 CLINT1Q14677 625 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 SLC25A26Q70HW3 274 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 ABHD3Q8WU67 409 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 YPEL4Q96NS1 127 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms