RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 MYL12BO14950 172 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 SELENOFO60613 162 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 NRASP01111 189 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 ZNF3P17036 446 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 RAB25P57735 213 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 MLLT11Q13015 90 aaPredicted RBP11.39□□□□□ -0.59
CXCR4-203ENST00000466288 EDDM3AQ14507 147 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 SPHARQ15513 63 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 ZNF684Q5T5D7 378 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 C9orf66Q5T8R8 295 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 ZNF695Q8IW36 515 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 TPRX1Q8N7U7 411 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 CHPT1Q8WUD6 406 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 PLGRKTQ9HBL7 147 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 GPR84Q9NQS5 396 aa11.39□□□□□ -0.59
CXCR4-203ENST00000466288 EXOGQ9Y2C4 368 aaKnown RBP11.39□□□□□ -0.59
CXCR4-203ENST00000466288 F8VVB4 439 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 F8VWA3 439 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 AIREO43918 545 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 IGLV1-47P01700 117 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 ZNF829Q3KNS6 432 aaPredicted RBP11.38□□□□□ -0.59
CXCR4-203ENST00000466288 LCN1P1Q5VSP4 162 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 TMEM42Q69YG0 159 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 ABHD12Q8N2K0 398 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 IQCF1Q8N6M8 205 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 OR51E1Q8TCB6 317 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 S100ZQ8WXG8 99 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 TEAD3Q99594 435 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 DCUN1D5Q9BTE7 237 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 FAM206AQ9NX38 181 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 LSM2Q9Y333 95 aaKnown RBP11.38□□□□□ -0.59
CXCR4-203ENST00000466288 ACOD1A6NK06 481 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 LEUTXA8MZ59 168 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 PSMD9O00233 223 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 ZNF182P17025 639 aaPredicted RBP11.38□□□□□ -0.59
CXCR4-203ENST00000466288 ARHGDIBP52566 201 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 ZFAND6Q6FIF0 208 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 COMMD2Q86X83 199 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 ANGPTL5Q86XS5 388 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 OR52I1Q8NGK6 324 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 OR5M8Q8NGP6 311 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 ZNF596Q8TC21 504 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 OTULINQ96BN8 352 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 RNFT2Q96EX2 444 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 SNX22Q96L94 193 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 PBOV1Q9GZY1 135 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 OR51V1Q9H2C8 321 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 GPR173Q9NS66 373 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 LINC00527Q9UJ94 153 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 ZNF256Q9Y2P7 627 aaPredicted RBP11.38□□□□□ -0.59
CXCR4-203ENST00000466288 MOB4Q9Y3A3 225 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 SMAD5-AS1Q9Y6J3 95 aa11.38□□□□□ -0.59
CXCR4-203ENST00000466288 HERC2O95714 4834 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 TMEM269A0A1B0GVZ9 245 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 M0R129 80 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 DHRS3O75911 302 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 ALOX5APP20292 161 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 PSMA1P25786 263 aaKnown RBP11.37□□□□□ -0.59
CXCR4-203ENST00000466288 WNT4P56705 351 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 IL24Q13007 206 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 SPCS2Q15005 226 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 MED22Q15528 200 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 CLVS2Q5SYC1 327 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 KRT77Q7Z794 578 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 RTN4RL2Q86UN3 420 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 OR52N4Q8NGI2 321 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 OR52N1Q8NH53 320 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 DYNC2LI1Q8TCX1 351 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 BORCS5Q969J3 196 aa11.37□□□□□ -0.59
CXCR4-203ENST00000466288 SEC14L6B5MCN3 397 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 LY6LH3BQJ8 138 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 IGHA1P01876 353 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 GALP22466 123 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 GPR50Q13585 617 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 DEFB136Q30KP8 78 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 TPTE2P1Q5T6R2 138 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 PRAMEF5Q5TYX0 476 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 MEPCEQ7L2J0 689 aaKnown RBP11.36□□□□□ -0.59
CXCR4-203ENST00000466288 COMMD1Q8N668 190 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 CITED4Q96RK1 184 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 PKIBQ9C010 78 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 WDR12Q9GZL7 423 aaKnown RBP11.36□□□□□ -0.59
CXCR4-203ENST00000466288 CHST6Q9GZX3 395 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 HMG20AQ9NP66 347 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 MTCH1Q9NZJ7 389 aa11.36□□□□□ -0.59
CXCR4-203ENST00000466288 CCDC59Q9P031 241 aaKnown RBP11.36□□□□□ -0.59
CXCR4-203ENST00000466288 DSCAML1Q8TD84 2053 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM172BPA6NC97 362 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM90A18PA6NE21 464 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM90A16PA6NEW6 464 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM90A20PA6NIJ5 464 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM90A9PA6NNJ1 464 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 SERPINE3A8MV23 424 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM90A12PA8MX19 464 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM90A5PA8MXJ8 464 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 PRR23D1E9PI22 279 aaPredicted RBP11.35□□□□□ -0.59
CXCR4-203ENST00000466288 BUB1B-PAK6H3BSN5 160 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM90A15PP0C7V4 464 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM90A13PP0C7W8 464 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms