RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 OCMP0CE72 109 aaPredicted RBP7.69□□□□□ -1.18
USP39-212ENST00000465514 ZNF44P15621 663 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 FASP25445 335 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 PTGFRP43088 359 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 OR3A4PP47883 348 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 THBS3P49746 956 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 LUMP51884 338 aaPredicted RBP7.69□□□□□ -1.18
USP39-212ENST00000465514 NANOS3P60323 173 aaKnown RBP7.69□□□□□ -1.18
USP39-212ENST00000465514 RBM39Q14498 530 aaKnown RBP7.69□□□□□ -1.18
USP39-212ENST00000465514 C17orf58Q2M2W7 97 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 HLA-DRB5Q30154 266 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 KRBOX4Q5JUW0 171 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 Q6P435 159 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 OR51D1Q8NGF3 324 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 OR4D6Q8NGJ1 314 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 OR5D18Q8NGL1 313 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 OR8J1Q8NGP2 316 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 OR10AC1Q8NH08 325 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 RFKQ969G6 155 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 CREB3L1Q96BA8 519 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 SPSB1Q96BD6 273 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 ISOC1Q96CN7 298 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 COQ2Q96H96 371 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 MBOAT4Q96T53 435 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 RIBC2Q9H4K1 309 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 NEK6Q9HC98 313 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 AP4S1Q9Y587 144 aa7.69□□□□□ -1.18
USP39-212ENST00000465514 A0A087X0M5 115 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 A0A1B0GX30 115 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 PSMB11A5LHX3 300 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 ZNF729A6NN14 1252 aaPredicted RBP7.68□□□□□ -1.18
USP39-212ENST00000465514 OOSP1A8MZH6 123 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 M0QZK8 103 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 SLC33A1O00400 549 aaPredicted RBP7.68□□□□□ -1.18
USP39-212ENST00000465514 DEGS1O15121 323 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 MT-ND2P03891 347 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 CSN2P05814 226 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 FAM106CPP0CH98 169 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 SNRPBP14678 240 aaKnown RBP7.68□□□□□ -1.18
USP39-212ENST00000465514 NFYBP25208 207 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 MNDAP41218 407 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 ATXN7L3Q14CW9 347 aaPredicted RBP7.68□□□□□ -1.18
USP39-212ENST00000465514 CCDC144NLQ6NUI1 221 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 FDX2Q6P4F2 183 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 KCTD20Q7Z5Y7 419 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 SAXO1Q8IYX7 474 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 OSR2Q8N2R0 312 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 CHST4Q8NCG5 386 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 OR51A4Q8NGJ6 313 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 OR13C3Q8NGS6 347 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 OR13C9Q8NGT0 318 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 DDB2Q92466 427 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 HRASLS5Q96KN8 279 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 GABARAPL3Q9BY60 117 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 PPIL3Q9H2H8 161 aaKnown RBP7.68□□□□□ -1.18
USP39-212ENST00000465514 RHOFQ9HBH0 211 aa7.68□□□□□ -1.18
USP39-212ENST00000465514 KBTBD11-OT1A0A1B0GTJ5 212 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 DAPL1A0PJW8 107 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 FAM90A18PA6NE21 464 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 FAM90A16PA6NEW6 464 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 FAM90A20PA6NIJ5 464 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 FAM90A9PA6NNJ1 464 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 FAM90A12PA8MX19 464 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 FAM90A5PA8MXJ8 464 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 J3QRE1 110 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 DYNC1I1O14576 645 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 SLC16A6O15403 523 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 SNRNP70P08621 437 aaKnown RBP7.67□□□□□ -1.18
USP39-212ENST00000465514 HTR1AP08908 422 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 FAM90A15PP0C7V4 464 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 FAM90A13PP0C7W8 464 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 FAM90A14PP0C7W9 464 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 FAM90A24PP0C7X0 464 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 CGB3P0DN86 165 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 CGB7P0DN87 165 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 ECI1P42126 302 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 CCR9P51686 369 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 CDK5R1Q15078 307 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 ZNF329Q86UD4 541 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 THNSL2Q86YJ6 484 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 OR9G1Q8NH87 305 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 LEAP2Q969E1 77 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 RNFT2Q96EX2 444 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 OSBPL10Q9BXB5 764 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 ZCCHC4Q9H5U6 513 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 ZMAT4Q9H898 229 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 EDA2RQ9HAV5 297 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 OR6C3Q9NZP0 311 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 OAZ3Q9UMX2 235 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 MYRFQ9Y2G1 1151 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 MOB4Q9Y3A3 225 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 SMAD5-AS1Q9Y6J3 95 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 HSPE1-MOB4S4R3N1 261 aa7.67□□□□□ -1.18
USP39-212ENST00000465514 SAC3D1A6NKF1 404 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 OR4C45A6NMZ5 311 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 J3QLW9 94 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 J3QR06 171 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 HSPB6O14558 160 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 IGHV3-7P01780 117 aa7.66□□□□□ -1.18
USP39-212ENST00000465514 TMEM225BP0DP42 221 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms