RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SUMF1Q8NBK3 374 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 BOD1Q96IK1 185 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 FGF23Q9GZV9 251 aaPredicted RBP15.72■□□□□ 0.11
SYNE4-204ENST00000465425 SH3BGRL3Q9H299 93 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 MTCH1Q9NZJ7 389 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 COLQQ9Y215 455 aaPredicted RBP15.72■□□□□ 0.11
SYNE4-204ENST00000465425 STRAPQ9Y3F4 350 aaKnown RBP15.72■□□□□ 0.11
SYNE4-204ENST00000465425 ZDBF2Q9HCK1 2354 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 ARR3P36575 388 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 AVPI1Q5T686 147 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 ZNF818PQ6ZRF7 136 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 HS3ST6Q96QI5 342 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 C19orf12Q9NSK7 152 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 CRIM1Q9NZV1 1036 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 IL36RNQ9UBH0 155 aa15.72■□□□□ 0.11
SYNE4-204ENST00000465425 ZNF503-AS2A6NEH8 195 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 ZNF266Q14584 549 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 TSC22D1Q15714 1073 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 GUK1Q16774 197 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 TMEM164Q5U3C3 297 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 LINC00696Q6ZRV3 163 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 MCEMP1Q8IX19 187 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 GAPTQ8N292 157 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 OR5A2Q8NGI9 324 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 RXFP4Q8TDU9 374 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 TMEM56Q96MV1 263 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 USB1Q9BQ65 265 aaKnown RBP15.71■□□□□ 0.11
SYNE4-204ENST00000465425 SMCO4Q9NRQ5 59 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 FOXJ2Q9P0K8 574 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 CACFD1Q9UGQ2 172 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 LHX6Q9UPM6 363 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 TMEM56-RWDD3S4R434 201 aa15.71■□□□□ 0.11
SYNE4-204ENST00000465425 NGFP01138 241 aa15.71■□□□□ 0.1
SYNE4-204ENST00000465425 CTXN2P0C2S0 81 aa15.71■□□□□ 0.1
SYNE4-204ENST00000465425 PRKACAP17612 351 aa15.71■□□□□ 0.1
SYNE4-204ENST00000465425 RND3P61587 244 aa15.71■□□□□ 0.1
SYNE4-204ENST00000465425 CMTM1Q8IZ96 169 aa15.71■□□□□ 0.1
SYNE4-204ENST00000465425 GPR87Q9BY21 358 aa15.71■□□□□ 0.1
SYNE4-204ENST00000465425 SPRY4Q9C004 299 aa15.71■□□□□ 0.1
SYNE4-204ENST00000465425 OPA3Q9H6K4 179 aa15.71■□□□□ 0.1
SYNE4-204ENST00000465425 ZNF552Q9H707 407 aaPredicted RBP15.71■□□□□ 0.1
SYNE4-204ENST00000465425 PLA2G3Q9NZ20 509 aa15.71■□□□□ 0.1
SYNE4-204ENST00000465425 ZNF724A8MTY0 619 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 C1QL1O75973 258 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 CRYBA1P05813 215 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 KCNJ3P48549 501 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 ASCL1P50553 236 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 POLR2GP62487 172 aaKnown RBP eCLIP15.7■□□□□ 0.1
SYNE4-204ENST00000465425 DCAF10Q5QP82 559 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 C5orf24Q7Z6I8 188 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 LINC00518Q8N0U6 118 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 GUCD1Q96NT3 240 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 ATP23Q9Y6H3 246 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 FREM1Q5H8C1 2179 aa15.7■□□□□ 0.1
SYNE4-204ENST00000465425 FAM24AA6NFZ4 105 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 SLC22A20A6NK97 555 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 SSSCA1O60232 199 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 ZNF883P0CG24 379 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 MPLP40238 635 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 AKR1D1P51857 326 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 VAMP2P63027 116 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 CLINT1Q14677 625 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 DBX2Q6ZNG2 339 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 TMEM182Q6ZP80 229 aaPredicted RBP15.69■□□□□ 0.1
SYNE4-204ENST00000465425 TMEM251Q8N6I4 163 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 PBDC1Q9BVG4 233 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 PLK3Q9H4B4 646 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 SPACA1Q9HBV2 294 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 AHCTF1Q8WYP5 2266 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 ANKRD30BLA7E2S9 258 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 CD300LBA8K4G0 201 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 HSD17B6O14756 317 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 ADAM20O43506 726 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 SYNGR1O43759 233 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 HERPUD1Q15011 391 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 SELENOHQ8IZQ5 122 aaKnown RBP15.69■□□□□ 0.1
SYNE4-204ENST00000465425 POM121L2Q96KW2 1035 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 SLC25A31Q9H0C2 315 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 ARRDC1-AS1Q9H2J1 176 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 RPS10P5Q9NQ39 176 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 BIN3Q9NQY0 253 aa15.69■□□□□ 0.1
SYNE4-204ENST00000465425 C21orf140B9A014 251 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 OMGP23515 440 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 APLNRP35414 380 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 RNPS1Q15287 305 aaKnown RBP15.68■□□□□ 0.1
SYNE4-204ENST00000465425 FAM213BQ8TBF2 198 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 GPHA2Q96T91 129 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 RIMS4Q9H426 269 aaPredicted RBP15.68■□□□□ 0.1
SYNE4-204ENST00000465425 PLEKHF2Q9H8W4 249 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 IGKV1D-13A0A0B4J2D9 117 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 MEX3AA1L020 520 aaKnown RBP15.68■□□□□ 0.1
SYNE4-204ENST00000465425 SLC34A2O95436 690 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 IGKV1-13P0DP09 117 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 S100GP29377 79 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 LINC00596Q86U02 117 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 MAGT1Q9H0U3 335 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 RNF122Q9H9V4 155 aa15.68■□□□□ 0.1
SYNE4-204ENST00000465425 COL27A1Q8IZC6 1860 aaPredicted RBP15.68■□□□□ 0.1
SYNE4-204ENST00000465425 DUXBA0A1W2PPF3 345 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 SS18L1O75177 396 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms