RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 FOSL1P15407 271 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 OTX1P32242 354 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 DAZAP2Q15038 168 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 REC114Q7Z4M0 266 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 MYPOPQ86VE0 399 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 CALHM1Q8IU99 346 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 GAPTQ8N292 157 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 CPNE4Q96A23 557 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 RSG1Q9BU20 258 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 SMDT1Q9H4I9 107 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 BCO1Q9HAY6 547 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 PTBP3O95758 552 aaKnown RBP10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 SCTP09683 121 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 EN2P19622 333 aaPredicted RBP10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 WDR25Q64LD2 544 aaPredicted RBP10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 PLXDC1Q8IUK5 500 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 SLC25A31Q9H0C2 315 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 IGHV1OR15-9A0A0B4J2B8 117 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 NTF4P34130 210 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 TMEM267Q0VDI3 215 aaPredicted RBP10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 SHHQ15465 462 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 FAM90A2PQ658T7 463 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 SSX7Q7RTT5 188 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 LILRB2Q8N423 598 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 IL22RA1Q8N6P7 574 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 NECAP1Q8NC96 275 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 PIGCQ92535 297 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 SIGLEC12Q96PQ1 595 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 NBEAQ8NFP9 2946 aa10.85□□□□□ -0.67
CLCNKA-204ENST00000464764 NRASP01111 189 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 PAX9P55771 341 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 SSTP61278 116 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 RPS18P62269 152 aaKnown RBP10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 ZFP36L1Q07352 338 aaKnown RBP10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF385CQ66K41 422 aaPredicted RBP10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 CCDC71LQ8N9Z2 235 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 ADPRHL1Q8NDY3 354 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 MTIF3Q9H2K0 278 aaKnown RBP10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 MTCH2Q9Y6C9 303 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 A0A087WZY1 265 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 A0A0G2JRQ6 117 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF732B4DXR9 585 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 ST8SIA5O15466 376 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 MSX1P28360 303 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 PKIAP61925 76 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 SLC35E3Q7Z769 313 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 PLPPR1Q8TBJ4 325 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 SPTSSAQ969W0 71 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 RASL10BQ96S79 203 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 ULBP2Q9BZM5 246 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 RPRMQ9NS64 109 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 EXPH5Q8NEV8 1989 aa10.84□□□□□ -0.67
CLCNKA-204ENST00000464764 NPIPA2E9PIF3 369 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 NPIPA3F8WFD2 350 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 CDS2O95674 445 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 APLNRP35414 380 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 MALLQ13021 153 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 Q3ZCU0 254 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 LRP11Q86VZ4 500 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 FGFBP3Q8TAT2 258 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 CDCA3Q99618 268 aaPredicted RBP10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 SIRT7Q9NRC8 400 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 CCL28Q9NRJ3 127 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 IL36RNQ9UBH0 155 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 COL5A1P20908 1838 aaPredicted RBP10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 KIAA2026Q5HYC2 2103 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 LOC102723971A0A1B0GUV8 181 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 SLC31A2O15432 143 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 DUX1O43812 170 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 IGLV3-19P01714 112 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 TCN2P20062 427 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 TUBG1P23258 451 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 H3F3AP84243 136 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 SLC25A24Q6NUK1 477 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 ZIC4Q8N9L1 334 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 RNF138Q8WVD3 245 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 SPSB1Q96BD6 273 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 ZNF705GA8MUZ8 300 aaPredicted RBP10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 GDF9O60383 454 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 PDCD6O75340 191 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 B4GALT1P15291 398 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 ZNF92Q03936 586 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 RAET1LQ5VY80 246 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 SLC25A26Q70HW3 274 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 C1orf87Q8N0U7 546 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 TMEM54Q969K7 222 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 ATG101Q9BSB4 218 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 CABLES2Q9BTV7 478 aa10.83□□□□□ -0.68
CLCNKA-204ENST00000464764 SMCO3A2RU48 225 aa10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 TSTD3H0UI37 97 aa10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 IFNL4K9M1U5 179 aa10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 UCP3P55916 312 aa10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 HNRNPKP61978 463 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 HIST1H3AP68431 136 aa10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 ID3Q02535 119 aa10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 TLE4Q04727 773 aa10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 ZNF726P1Q15940 193 aa10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 C10orf128Q5T292 105 aa10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 HIST2H3PS2Q5TEC6 136 aa10.82□□□□□ -0.68
CLCNKA-204ENST00000464764 BEND4Q6ZU67 534 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms