RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 THAP3Q8WTV1 239 aaPredicted RBP6.3□□□□□ -1.4
USP48-206ENST00000464577 MBD3L1Q8WWY6 194 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 ZDHHC16Q969W1 377 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 ZNF501Q96CX3 271 aaPredicted RBP6.3□□□□□ -1.4
USP48-206ENST00000464577 SSX3Q99909 188 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 PRO1933Q9H354 126 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 SRD5A3Q9H8P0 318 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 SDF2L1Q9HCN8 221 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 CD207Q9UJ71 328 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 ZNF391Q9UJN7 358 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 RNF150Q9ULK6 438 aa6.3□□□□□ -1.4
USP48-206ENST00000464577 ARID1BQ8NFD5 2236 aaPredicted RBP6.29□□□□□ -1.4
USP48-206ENST00000464577 A0A087WZY1 265 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 IGKV1-12A0A0C4DH73 117 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A10PA6NDY2 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A18PA6NE21 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A16PA6NEW6 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A20PA6NIJ5 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A8PA6NJQ4 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A7PA6NKC0 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 SHISA7A6NL88 538 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A22PA8MWA6 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A12PA8MX19 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A5PA8MXJ8 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A23PA8MXZ1 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 DUX1O43812 170 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 CST7O76096 145 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 VAMP5O95183 116 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 IFNA5P01569 189 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 IGKV1D-12P01611 117 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A15PP0C7V4 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A13PP0C7W8 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A14PP0C7W9 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM90A24PP0C7X0 464 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 PGA5P0DJD9 388 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 SLC25A6P12236 298 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 TCN2P20062 427 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 GNRHRP30968 328 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 RBM11P57052 281 aaKnown RBP6.29□□□□□ -1.4
USP48-206ENST00000464577 OR1D5P58170 312 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 RAB11AP62491 216 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 MRPS34P82930 218 aaKnown RBP6.29□□□□□ -1.4
USP48-206ENST00000464577 CFHR1Q03591 330 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 HYAL1Q12794 435 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 PMS2P11Q13670 270 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 DEFB133Q30KQ1 61 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 DMRTA1Q5VZB9 504 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 ABLIM2Q6H8Q1 611 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 SHISA6Q6ZSJ9 500 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 TGIF2LYQ8IUE0 185 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 DMRTC2Q8IXT2 367 aaPredicted RBP6.29□□□□□ -1.4
USP48-206ENST00000464577 OR10G3Q8NGC4 313 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 OR10A7Q8NGE5 316 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 OR5D13Q8NGL4 314 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 OR2V1Q8NHB1 315 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 TECTBQ96PL2 329 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 PYGO2Q9BRQ0 406 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 AGMATQ9BSE5 352 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 PSMG3Q9BT73 122 aaPredicted RBP6.29□□□□□ -1.4
USP48-206ENST00000464577 NDUFAF3Q9BU61 184 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 GPR87Q9BY21 358 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 MAGT1Q9H0U3 335 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 PLEK2Q9NYT0 353 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 CA14Q9ULX7 337 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 RNF115Q9Y4L5 304 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 TDRD6O60522 2096 aaKnown RBP6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM221AA4D161 298 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 A8MWP6 167 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 H0Y980 276 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 OR2J2O76002 312 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 ZFAND5O76080 213 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 DKK1O94907 266 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 CD38P28907 300 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FUT6P51993 359 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 PAX9P55771 341 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 ZNF154Q13106 437 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 KRTAP27-1Q3LI81 207 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FAM27BQ5VT28 67 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 ZNF385CQ66K41 422 aaPredicted RBP6.29□□□□□ -1.4
USP48-206ENST00000464577 ZNF787Q6DD87 383 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 TCEAL6Q6IPX3 200 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 RHBDD2Q6NTF9 364 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 SLC25A26Q70HW3 274 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 RABEPKQ7Z6M1 372 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 MAML2Q8IZL2 1156 aaPredicted RBP6.29□□□□□ -1.4
USP48-206ENST00000464577 OR1P1Q8NH06 330 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 OR4X1Q8NH49 305 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 CA5BP1Q8WTZ4 195 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 DNASE2BQ8WZ79 361 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 SNX22Q96L94 193 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 LURAP1Q96LR2 239 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 CABLES2Q9BTV7 478 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 SLC7A10Q9NS82 523 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 FGF21Q9NSA1 209 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 CHD7Q9P2D1 2997 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 GNG13Q9P2W3 67 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 ST3GAL6Q9Y274 331 aa6.29□□□□□ -1.4
USP48-206ENST00000464577 SYNGR3O43761 229 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 CHST1O43916 411 aa6.28□□□□□ -1.4
USP48-206ENST00000464577 TUSC2O75896 110 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms