RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 GOLGA8QA0A0J9YX86 632 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 FAM183AA6NL82 134 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 A8MWP4 228 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 RNASEK-C17orf49H0YIS7 233 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 K7ERQ8 282 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 FABP7O15540 132 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 CPSF4O95639 269 aaKnown RBP1.99□□□□□ -2.09
CLK1-208ENST00000464454 CA2P00918 260 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 IGHMP01871 453 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 TSPOP30536 169 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 PLTPP55058 493 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 PRDX1Q06830 199 aaKnown RBP1.99□□□□□ -2.09
CLK1-208ENST00000464454 FLOT2Q14254 428 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 ZNF141Q15928 474 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 LGALSLQ3ZCW2 172 aaPredicted RBP1.99□□□□□ -2.09
CLK1-208ENST00000464454 TCAIMQ8N3R3 496 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 ZNF586Q9NXT0 402 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 ATRNO75882 1429 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 LTBP4Q8N2S1 1624 aa1.99□□□□□ -2.09
CLK1-208ENST00000464454 TMEM94Q12767 1356 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 ABCB11O95342 1321 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 USP42Q9H9J4 1324 aaKnown RBP1.98□□□□□ -2.09
CLK1-208ENST00000464454 HIVEP2P31629 2446 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 A0A0B4J2C4 111 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 TCF21O43680 179 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 SYNGR2O43760 224 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 POP7O75817 140 aaKnown RBP1.98□□□□□ -2.09
CLK1-208ENST00000464454 SPAM1P38567 509 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 AQP5P55064 265 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 WDR59Q6PJI9 974 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 COPS6Q7L5N1 327 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 MARCH3Q86UD3 253 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 EIF4E3Q8N5X7 224 aaKnown RBP1.98□□□□□ -2.09
CLK1-208ENST00000464454 ZNF738Q8NE65 137 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 FAM45AQ8TCE6 357 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 APOBEC3DQ96AK3 386 aaPredicted RBP1.98□□□□□ -2.09
CLK1-208ENST00000464454 IGF2BP2-AS1Q96M15 143 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 CFAP53Q96M91 514 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 SERPINB11Q96P15 392 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 PKMYT1Q99640 499 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 TAPBPLQ9BX59 468 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 ZNF230Q9UIE0 474 aaPredicted RBP1.98□□□□□ -2.09
CLK1-208ENST00000464454 MCTS1Q9ULC4 181 aaKnown RBP1.98□□□□□ -2.09
CLK1-208ENST00000464454 SNX24Q9Y343 169 aa1.98□□□□□ -2.09
CLK1-208ENST00000464454 IGHV1-45A0A0A0MS14 117 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 TRAV8-2A0A0B4J237 113 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 GGTLC3B5MD39 225 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 SGCEO43556 437 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 SNAP29O95721 258 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 PDYNP01213 254 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 GABRA1P14867 456 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 SPNP16150 400 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 CRABP2P29373 138 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 PYCR1P32322 319 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 RHOAP61586 193 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 TPBGQ13641 420 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 CASP8Q14790 479 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 OR4D1Q15615 310 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 KRTAP25-1Q3LHN0 102 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 FAM162BQ5T6X4 162 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 DGAT2L6Q6ZPD8 337 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 OLIG3Q7RTU3 272 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 LRP11Q86VZ4 500 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 SLC25A45Q8N413 288 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 ZIC4Q8N9L1 334 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 GATD1Q8NB37 220 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 PGLYRP3Q96LB9 341 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 CYTH2Q99418 400 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 TAS2R13Q9NYV9 303 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 NAGKQ9UJ70 344 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 ENPP5Q9UJA9 477 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 POMPQ9Y244 141 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
CLK1-208ENST00000464454 AQP9O43315 295 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 GPR75O95800 540 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 CGB3P0DN86 165 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 CGB7P0DN87 165 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 NQO2P16083 231 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 ZNF708P17019 499 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 S100A2P29034 98 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 UGT2B10P36537 528 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 TGFBR2P37173 567 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 BCL2A1Q16548 175 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 ELP2Q6IA86 826 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 CYHR1Q6ZMK1 362 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 CLEC20AQ6ZU45 233 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 LYZL2Q7Z4W2 148 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 TMEM25Q86YD3 366 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 C17orf78Q8N4C9 275 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 LY6G5BQ8NDX9 201 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 DTD1Q8TEA8 209 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 MAL2Q969L2 176 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 CLDN23Q96B33 292 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 MRAP2Q96G30 205 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 SLC25A44Q96H78 314 aaPredicted RBP1.96□□□□□ -2.1
CLK1-208ENST00000464454 TRIB3Q96RU7 358 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 FAAP24Q9BTP7 215 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 TREM1Q9NP99 234 aa1.96□□□□□ -2.1
CLK1-208ENST00000464454 ZNF443Q9Y2A4 671 aaPredicted RBP1.96□□□□□ -2.1
CLK1-208ENST00000464454 FADS3Q9Y5Q0 445 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms