RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 CD28P10747 220 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 POU3F4P49335 361 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 CEBPDP49716 269 aaPredicted RBP18.75■□□□□ 0.59
SSNA1-203ENST00000463511 ZP1P60852 638 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 ERVK11-1P61568 191 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 SMIM21Q3B7S5 101 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 ZNF782Q6ZMW2 699 aaPredicted RBP18.75■□□□□ 0.59
SSNA1-203ENST00000463511 LHFPL4Q7Z7J7 247 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 SATL1Q86VE3 508 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 SLAMF9Q96A28 289 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 NRIP2Q9BQI9 281 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 MMP28Q9H239 520 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 SERTAD4Q9NUC0 356 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 RASL12Q9NYN1 266 aa18.75■□□□□ 0.59
SSNA1-203ENST00000463511 DNAH3Q8TD57 4116 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 MAGEB3O15480 346 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 SMIM18P0DKX4 95 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 JUNBP17275 347 aaPredicted RBP18.74■□□□□ 0.59
SSNA1-203ENST00000463511 DDI2Q5TDH0 399 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 CD200R1LQ6Q8B3 271 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 BATF2Q8N1L9 274 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 DYNAPQ8N1N2 210 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 ZNF561Q8N587 486 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 DTX3Q8N9I9 347 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 OR4S1Q8NGB4 309 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 OR5D18Q8NGL1 313 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 PHYHIPQ92561 330 aa18.74■□□□□ 0.59
SSNA1-203ENST00000463511 IGKV1-12A0A0C4DH73 117 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 TRDV1A0A1B0GX56 115 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 F8VVB4 439 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 F8VWA3 439 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 IGKV1D-12P01611 117 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 MAS1P04201 325 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 SRMP19623 302 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 RAB13P51153 203 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 ZNF273Q14593 569 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 HSD17B12Q53GQ0 312 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 LRRTM1Q86UE6 522 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 R3HDM4Q96D70 268 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 CEP19Q96LK0 163 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 HES4Q9HCC6 221 aa18.73■□□□□ 0.59
SSNA1-203ENST00000463511 hCG_1809904A0A1W2PP81 198 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 A0A1W2PPE2 198 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 A0A1W2PR64 198 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 A0A1W2PRV1 198 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 PRDX2P32119 198 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 NPBWR2P48146 333 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 LOXL3P58215 753 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 TMEM219Q86XT9 240 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 LYPD6Q86Y78 171 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 SAXO1Q8IYX7 474 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 GPER1Q99527 375 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 CITED2Q99967 270 aaPredicted RBP18.72■□□□□ 0.59
SSNA1-203ENST00000463511 NECAP2Q9NVZ3 263 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 AURKAIP1Q9NWT8 199 aaPredicted RBP18.72■□□□□ 0.59
SSNA1-203ENST00000463511 TCF19Q9Y242 345 aa18.72■□□□□ 0.59
SSNA1-203ENST00000463511 VGLL3A8MV65 326 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 NXPH2O95156 264 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 CYB5AP00167 134 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 TMEM225BP0DP42 221 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 BCL3P20749 454 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 GALP22466 123 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 ZNF93P35789 620 aaPredicted RBP18.71■□□□□ 0.59
SSNA1-203ENST00000463511 CCBE1Q6UXH8 406 aaPredicted RBP18.71■□□□□ 0.59
SSNA1-203ENST00000463511 NDUFA11Q86Y39 141 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 Q8N2B8 174 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 PHF21AQ96BD5 680 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 CPNE2Q96FN4 548 aaPredicted RBP18.71■□□□□ 0.59
SSNA1-203ENST00000463511 VCX3AQ9NNX9 186 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 OR14J1Q9UGF5 321 aa18.71■□□□□ 0.59
SSNA1-203ENST00000463511 FAM90A8PA6NJQ4 464 aa18.7■□□□□ 0.58
SSNA1-203ENST00000463511 ADARB2-AS1A8MUL3 147 aa18.7■□□□□ 0.58
SSNA1-203ENST00000463511 OR3A4PP47883 348 aa18.7■□□□□ 0.58
SSNA1-203ENST00000463511 ASCL4Q6XD76 172 aa18.7■□□□□ 0.58
SSNA1-203ENST00000463511 CDH26Q8IXH8 852 aa18.7■□□□□ 0.58
SSNA1-203ENST00000463511 OR4F17Q8NGA8 305 aa18.7■□□□□ 0.58
SSNA1-203ENST00000463511 OR4F4Q96R69 305 aa18.7■□□□□ 0.58
SSNA1-203ENST00000463511 ARL6IP5O75915 188 aa18.69■□□□□ 0.58
SSNA1-203ENST00000463511 KDM4BO94953 1096 aa18.69■□□□□ 0.58
SSNA1-203ENST00000463511 ARG1P05089 322 aa18.69■□□□□ 0.58
SSNA1-203ENST00000463511 CD37P11049 281 aa18.69■□□□□ 0.58
SSNA1-203ENST00000463511 CD36P16671 472 aa18.69■□□□□ 0.58
SSNA1-203ENST00000463511 PTGFRP43088 359 aa18.69■□□□□ 0.58
SSNA1-203ENST00000463511 PXT1Q8NFP0 134 aa18.69■□□□□ 0.58
SSNA1-203ENST00000463511 WIPF2Q8TF74 440 aaPredicted RBP18.69■□□□□ 0.58
SSNA1-203ENST00000463511 TNFAIP8L1Q8WVP5 186 aa18.69■□□□□ 0.58
SSNA1-203ENST00000463511 FOXRED1Q96CU9 486 aaPredicted RBP18.69■□□□□ 0.58
SSNA1-203ENST00000463511 ABCB10Q9NRK6 738 aa18.69■□□□□ 0.58
SSNA1-203ENST00000463511 RBFOX1Q9NWB1 397 aaKnown RBP18.69■□□□□ 0.58
SSNA1-203ENST00000463511 STUB1Q9UNE7 303 aa18.69■□□□□ 0.58
SSNA1-203ENST00000463511 MEX3AA1L020 520 aaKnown RBP18.68■□□□□ 0.58
SSNA1-203ENST00000463511 A6NDX4 124 aa18.68■□□□□ 0.58
SSNA1-203ENST00000463511 PEX14O75381 377 aa18.68■□□□□ 0.58
SSNA1-203ENST00000463511 TK1P04183 234 aa18.68■□□□□ 0.58
SSNA1-203ENST00000463511 CALRP27797 417 aaKnown RBP18.68■□□□□ 0.58
SSNA1-203ENST00000463511 DLX6P56179 175 aa18.68■□□□□ 0.58
SSNA1-203ENST00000463511 SSX2Q16385 188 aa18.68■□□□□ 0.58
SSNA1-203ENST00000463511 Q8IYB0 196 aa18.68■□□□□ 0.58
SSNA1-203ENST00000463511 JAGN1Q8N5M9 183 aa18.68■□□□□ 0.58
SSNA1-203ENST00000463511 NKAIN3Q8N8D7 197 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms