RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 PTTG2Q9NZH5 202 aa11.5□□□□□ -0.57
PHACTR4-203ENST00000463428 CLN8Q9UBY8 286 aa11.5□□□□□ -0.57
PHACTR4-203ENST00000463428 ELF5Q9UKW6 265 aaPredicted RBP11.5□□□□□ -0.57
PHACTR4-203ENST00000463428 POLR3KQ9Y2Y1 108 aaPredicted RBP11.5□□□□□ -0.57
PHACTR4-203ENST00000463428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.49□□□□□ -0.572e-10■■■■□ 21.9
PHACTR4-203ENST00000463428 TRAV18A0A075B6X5 111 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 UBE2QL1A1L167 161 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 FAM25AB3EWG3 89 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 FAM25CB3EWG5 89 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 FAM25GB3EWG6 89 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 GPR37O15354 613 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 PHF1O43189 567 aaPredicted RBP11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 HLA-DQB1P01920 261 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 MELTFP08582 738 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 GNB3P16520 340 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 KCNJ3P48549 501 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 GNB2P62879 340 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 PAX2Q02962 417 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 AESQ08117 197 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 RBM39Q14498 530 aaKnown RBP11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 ATXN7L3Q14CW9 347 aaPredicted RBP11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 CDNFQ49AH0 187 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 MAPK1IP1LQ8NDC0 245 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 DYRK2Q92630 601 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 DACT3Q96B18 629 aaPredicted RBP11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 SOSTQ9BQB4 213 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 SSBP3Q9BWW4 388 aaPredicted RBP11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 NCOR1P1Q9H4R4 102 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 ZMAT3Q9HA38 289 aaKnown RBP11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 AK3Q9UIJ7 227 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 WNK2Q9Y3S1 2297 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 CREBBPQ92793 2442 aa11.49□□□□□ -0.57
PHACTR4-203ENST00000463428 ZNF469Q96JG9 3925 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 NDUFB7P17568 137 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 MNDAP41218 407 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 GLIPR1P48060 266 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 TAS2R20P59543 309 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 C11orf91Q3C1V1 193 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 ESCO2Q56NI9 601 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 SLC35E4Q6ICL7 350 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 CNIH2Q6PI25 160 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 ZNF497Q6ZNH5 498 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 BTN2A1Q7KYR7 527 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 CCDC190Q86UF4 302 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 IZUMO1Q8IYV9 350 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 TPRX1Q8N7U7 411 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 LY6G5BQ8NDX9 201 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 PHF21AQ96BD5 680 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 DCTN5Q9BTE1 182 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 AUNIPQ9H7T9 357 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 ETAA1Q9NY74 926 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 EXTL2Q9UBQ6 330 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 ABCA1O95477 2261 aa11.48□□□□□ -0.57
PHACTR4-203ENST00000463428 SERPINE3A8MV23 424 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 C22orf46C9J442 243 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 H7C1Q1 480 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 CA11O75493 328 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 FOXH1O75593 365 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 NAPSAO96009 420 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 MT-ND4P03905 459 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 HEXAP06865 529 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 GSTP1P09211 210 aaKnown RBP11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 P2RX3P56373 397 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 ARL6IP1Q15041 203 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 KRBOX4Q5JUW0 171 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 SPNS3Q6ZMD2 512 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 Q6ZPA2 131 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 GDPD3Q7L5L3 318 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 TCF23Q7RTU1 214 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 C8orf46Q8TAG6 207 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 NEK7Q8TDX7 302 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 DIRAS2Q96HU8 199 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 HDHD3Q9BSH5 251 aaPredicted RBP11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 C19orf12Q9NSK7 152 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 KIF25Q9UIL4 384 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 ADAM30Q9UKF2 790 aa11.47□□□□□ -0.57
PHACTR4-203ENST00000463428 LOC105371242A0A075B767 164 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 TMEM235A6NFC5 223 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 TPPPO94811 219 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 ECDO95905 644 aaPredicted RBP11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 CGB3P0DN86 165 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 CGB7P0DN87 165 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 IGHV4-31P0DP07 118 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 PTHLHP12272 177 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 EDDM3BP56851 147 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 LCN2P80188 198 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 EDDM3AQ14507 147 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 PNLIPRP3Q17RR3 467 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 CR1LQ2VPA4 569 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 TMEM249Q2WGJ8 235 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 TMEM69Q5SWH9 247 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 HACD4Q5VWC8 232 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 TMEM200BQ69YZ2 307 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 ZNF880Q6PDB4 577 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 MRPL30Q8TCC3 161 aaKnown RBP11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 H1FXQ92522 213 aaKnown RBP11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 CORO2AQ92828 525 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 ABHD1Q96SE0 405 aa11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 ING3Q9NXR8 418 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms