RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PRSS57Q6UWY2 283 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 ZNF497Q6ZNH5 498 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 SLC36A1Q7Z2H8 476 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 OR8H2Q8N162 312 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 FGFRL1Q8N441 504 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 DYRK2Q92630 601 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 GCDHQ92947 438 aaPredicted RBP11.92□□□□□ -0.5
COL6A1-202ENST00000463060 COQ2Q96H96 371 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 OCSTAMPQ9BR26 566 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 BPESC1Q9GZL8 116 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 PPA2Q9H2U2 334 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 NCOR1P1Q9H4R4 102 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 MIOXQ9UGB7 285 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 ANAPC10Q9UM13 185 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 TEX15Q9BXT5 2789 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 IGHV4-30-2A0A087WSY4 118 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 TRBV6-6A0A0A6YYG2 114 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 POM121CA8CG34 1229 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 GABARAPH6UMI1 98 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 SULT1C2O00338 296 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 HSPB6O14558 160 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 MGST3O14880 152 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 MT-ND4P03905 459 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 CD40LGP29965 261 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 ERP29P30040 261 aaKnown RBP11.91□□□□□ -0.5
COL6A1-202ENST00000463060 PRSS3P35030 304 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 MRPS10P82664 201 aaKnown RBP11.91□□□□□ -0.5
COL6A1-202ENST00000463060 GUCA2AQ02747 115 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 SLC35E4Q6ICL7 350 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 ZNF880Q6PDB4 577 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 CLEC2AQ6UVW9 174 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 SNX29P2Q8IUI4 249 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 SPICQ8N5J4 248 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 GDPD1Q8N9F7 314 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 ASCC1Q8N9N2 400 aaKnown RBP11.91□□□□□ -0.5
COL6A1-202ENST00000463060 OR5D13Q8NGL4 314 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 OR52I2Q8NH67 350 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 SMIM4Q8WVI0 70 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 HDHD3Q9BSH5 251 aaPredicted RBP11.91□□□□□ -0.5
COL6A1-202ENST00000463060 CHST6Q9GZX3 395 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 SCPEP1Q9HB40 452 aa11.91□□□□□ -0.5
COL6A1-202ENST00000463060 A0A096LNT2 108 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 ISPDA4D126 451 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 NKX6-3A6NJ46 265 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 DVL1O14640 695 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 IGHV2-5P01817 119 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 NAT1P18440 290 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 DGCR2P98153 550 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 AESQ08117 197 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 ZNF846Q147U1 533 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 GRK1Q15835 563 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 CLEC12BQ2HXU8 276 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 CR1LQ2VPA4 569 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 CLDND2Q8NHS1 167 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 PPP1R35Q8TAP8 253 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
COL6A1-202ENST00000463060 NUDCD2Q8WVJ2 157 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 NEIL1Q96FI4 390 aaPredicted RBP11.9□□□□□ -0.5
COL6A1-202ENST00000463060 PIMREGQ9BSJ6 248 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 WDR12Q9GZL7 423 aaKnown RBP11.9□□□□□ -0.5
COL6A1-202ENST00000463060 ETAA1Q9NY74 926 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 MTFP1Q9UDX5 166 aa11.9□□□□□ -0.5
COL6A1-202ENST00000463060 RBMX2Q9Y388 322 aaKnown RBP11.9□□□□□ -0.5
COL6A1-202ENST00000463060 LANCL1O43813 399 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 ORC5O43913 435 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 LPLP06858 475 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 CGB3P0DN86 165 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 CGB7P0DN87 165 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 DTYMKP23919 212 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 GLIPR1P48060 266 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 ARFRP1Q13795 201 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 ATXN7L3Q14CW9 347 aaPredicted RBP11.89□□□□□ -0.51
COL6A1-202ENST00000463060 BAK1Q16611 211 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 SRSF7Q16629 238 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL6A1-202ENST00000463060 PYDC2Q56P42 97 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 Q8N402 240 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 TRIM63Q969Q1 353 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 CMSS1Q9BQ75 279 aaKnown RBP11.89□□□□□ -0.51
COL6A1-202ENST00000463060 RIMS4Q9H426 269 aaPredicted RBP11.89□□□□□ -0.51
COL6A1-202ENST00000463060 MBNL3Q9NUK0 354 aaKnown RBP11.89□□□□□ -0.51
COL6A1-202ENST00000463060 SLC25A10Q9UBX3 287 aaPredicted RBP11.89□□□□□ -0.51
COL6A1-202ENST00000463060 KLK11Q9UBX7 282 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 KIF25Q9UIL4 384 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 MALRD1Q5VYJ5 2156 aa11.89□□□□□ -0.51
COL6A1-202ENST00000463060 IGHV4-61A0A0C4DH41 118 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 TMEM30CPA0ZSE6 113 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 J3QRK9 145 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 NDUFB3O43676 98 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 FCGR3AP08637 254 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 CD3GP09693 182 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 RPS2P15880 293 aaKnown RBP11.88□□□□□ -0.51
COL6A1-202ENST00000463060 SLC25A16P16260 332 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 P2RX3P56373 397 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 GNG2P59768 71 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 SEC61A1P61619 476 aaKnown RBP11.88□□□□□ -0.51
COL6A1-202ENST00000463060 LRRC10Q5BKY1 277 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 WDR25Q64LD2 544 aaPredicted RBP11.88□□□□□ -0.51
COL6A1-202ENST00000463060 Q6ZS49 121 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 HOGA1Q86XE5 327 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms