RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 WDR86Q86TI4 376 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 LINC00518Q8N0U6 118 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 RELL2Q8NC24 303 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-213ENST00000462730 ST8SIA2Q92186 375 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 FAHD2AQ96GK7 314 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 SCGB3A2Q96PL1 93 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 PIGMQ9H3S5 423 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 GPR132Q9UNW8 380 aa12.33□□□□□ -0.44
HDAC6-213ENST00000462730 A0A0D9SG52 128 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 LRP5LA4QPB2 252 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 OR5H14A6NHG9 310 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 CEACAM18A8MTB9 384 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 RHBDL1O75783 438 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 VAMP1P23763 118 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 ZNF83P51522 516 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 MPV17LQ2QL34 196 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 AADACL3Q5VUY0 350 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 UQCC3Q6UW78 93 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 MRGPRGQ86SM5 289 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 FAM169BQ8N8A8 192 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 OR5M8Q8NGP6 311 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 BCL2L14Q9BZR8 327 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 ZNF286AQ9HBT8 521 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 CHMP1AQ9HD42 196 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-213ENST00000462730 PURGQ9UJV8 347 aaKnown RBP12.32□□□□□ -0.44
HDAC6-213ENST00000462730 FZR1Q9UM11 496 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 PRSS44E7EML9 344 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 H0YL77 283 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 NUPL2O15504 423 aaKnown RBP12.32□□□□□ -0.44
HDAC6-213ENST00000462730 PGAM2P15259 253 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 DUSP1P28562 367 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 IL13RA1P78552 427 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 FGL1Q08830 312 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 FAM27E3Q08E93 113 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 LY6DQ14210 128 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 TMEM211Q6ICI0 200 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 SLC22A25Q6T423 547 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 PEG10Q86TG7 708 aaKnown RBP12.32□□□□□ -0.44
HDAC6-213ENST00000462730 FAM58AQ8N1B3 248 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 CASTOR1Q8WTX7 329 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 ZNF2Q9BSG1 426 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-213ENST00000462730 PLK3Q9H4B4 646 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 C5orf66Q9H5L9 145 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 NECAP2Q9NVZ3 263 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 RASL12Q9NYN1 266 aa12.32□□□□□ -0.44
HDAC6-213ENST00000462730 RCC2Q9P258 522 aaKnown RBP12.32□□□□□ -0.44
HDAC6-213ENST00000462730 TMEM8BA6NDV4 472 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 C3orf80F5H4A9 247 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 M0R1B8 84 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 TIMM8AO60220 97 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-213ENST00000462730 APOC3P02656 99 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 PI3P19957 117 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 TUBG1P23258 451 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 CCKARP32238 428 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 ZNF345Q14585 488 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 LIN54Q6MZP7 749 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 LPCAT3Q6P1A2 487 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 LINC00596Q86U02 117 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 SCCPDHQ8NBX0 429 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 TMEM185AQ8NFB2 350 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 TMEM230Q96A57 120 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 TUBG2Q9NRH3 451 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 TMEM100Q9NV29 134 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 SPTA1P02549 2419 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 PRR14LQ5THK1 2151 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 ESPL1Q14674 2120 aa12.31□□□□□ -0.44
HDAC6-213ENST00000462730 ATRXP46100 2492 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 TRGV8A0A0C4DH27 118 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 HSPB6O14558 160 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 S100A6P06703 90 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 OR5H8P0DN80 308 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 NAAAQ02083 359 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 SRSF4Q08170 494 aaKnown RBP12.3□□□□□ -0.44
HDAC6-213ENST00000462730 IL13RA2Q14627 380 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 ZNF718Q3SXZ3 478 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 FAM74A1Q5RGS3 127 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 ATRAIDQ6UW56 229 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 Q6ZPA2 131 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 KCNRGQ8N5I3 272 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 OR8G5Q8NG78 346 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 NEK7Q8TDX7 302 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 MITD1Q8WV92 249 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 PHYHIPLQ96FC7 376 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 PHB2Q99623 299 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 RTBDNQ9BSG5 229 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-213ENST00000462730 BARX1Q9HBU1 254 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-213ENST00000462730 NDRG3Q9UGV2 375 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-213ENST00000462730 IGHV3-64DA0A0J9YX35 117 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 KANTRA0A1W2PQU2 76 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 KITLGP21583 273 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 GCH1P30793 250 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 HOXA1P49639 335 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-213ENST00000462730 FABP6P51161 128 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 TMEM128Q5BJH2 165 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 FAM76BQ5HYJ3 339 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 ST6GALNAC3Q8NDV1 305 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 MUCL1Q96DR8 90 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 VKORC1Q9BQB6 163 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 WDR13Q9H1Z4 485 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms