RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 CISD1Q9NZ45 108 aaKnown RBP3.04□□□□□ -1.92
COL8A1-204ENST00000462604 TREM2Q9NZC2 230 aa3.04□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF581Q9P0T4 197 aa3.04□□□□□ -1.92
COL8A1-204ENST00000462604 GNG13Q9P2W3 67 aa3.04□□□□□ -1.92
COL8A1-204ENST00000462604 TINAGQ9UJW2 476 aa3.04□□□□□ -1.92
COL8A1-204ENST00000462604 RNF150Q9ULK6 438 aa3.04□□□□□ -1.92
COL8A1-204ENST00000462604 LIPGQ9Y5X9 500 aa3.04□□□□□ -1.92
COL8A1-204ENST00000462604 MYOFQ9NZM1 2061 aa3.04□□□□□ -1.92
COL8A1-204ENST00000462604 CENPFP49454 3210 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 LOC102723996A0A087X1L8 192 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 TRBV23-1A0A0A0MS06 115 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 TGIF2-C20orf24A0A0A6YYL0 155 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 A0A0J9YW62 118 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 IGHV5-10-1A0A0J9YXX1 117 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 A0A1B0GU03 582 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 SMCO3A2RU48 225 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 SLC22A20A6NK97 555 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF727A8MUV8 499 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 G3V3Y1 287 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 TSTD3H0UI37 97 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 TRAPPC2LH3BP13 241 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CLDN34H7C241 214 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CYB5BO43169 146 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CHST1O43916 411 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZIC3O60481 467 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CBR3O75828 277 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 TUSC2O75896 110 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CST7O76096 145 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 PTBP3O95758 552 aaKnown RBP3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CYB5R3P00387 301 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-204ENST00000462604 IFNA10P01566 189 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 OPN1MWP04001 364 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 P04436 131 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 RPLP1P05386 114 aaKnown RBP3.03□□□□□ -1.92
COL8A1-204ENST00000462604 OPN1MW2P0DN77 364 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 OPN1MW3P0DN78 364 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 GLI4P10075 376 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CCL3P10147 92 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 BCL2P10415 239 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 PF4V1P10720 104 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 B4GALT1P15291 398 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF32P17041 273 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 EPHA1P21709 976 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 UCP1P25874 307 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 SRD5A2P31213 254 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 LTBRP36941 435 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CD200P41217 278 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ASCL1P50553 236 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CARD18P57730 90 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 RAC3P60763 192 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 SSTP61278 116 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 FGF12P61328 243 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 PKIAP61925 76 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 RAB11AP62491 216 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 HBG1P69891 147 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 HBG2P69892 147 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CCL20P78556 96 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CCL7P80098 99 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 PSG4Q00888 419 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF92Q03936 586 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF154Q13106 437 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 PRDX4Q13162 271 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ELOBQ15370 118 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 MPV17LQ2QL34 196 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ACSF3Q4G176 576 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-204ENST00000462604 TRIM61Q5EBN2 209 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 NMSQ5H8A3 153 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CXorf66Q5JRM2 361 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-204ENST00000462604 C9orf152Q5JTZ5 239 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 RIPPLY2Q5TAB7 128 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF385CQ66K41 422 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF787Q6DD87 383 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ABLIM2Q6H8Q1 611 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 OR2T2Q6IF00 324 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 TCEAL6Q6IPX3 200 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 GUSBP11Q6P575 273 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF574Q6ZN55 896 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-204ENST00000462604 MOB1BQ7L9L4 216 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.03□□□□□ -1.92
COL8A1-204ENST00000462604 MRPL21Q7Z2W9 205 aaKnown RBP3.03□□□□□ -1.92
COL8A1-204ENST00000462604 P4HA3Q7Z4N8 544 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 LINC00596Q86U02 117 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 DTX1Q86Y01 620 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 MKXQ8IYA7 352 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZDHHC23Q8IYP9 409 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 HIST3H2BBQ8N257 126 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 GAPTQ8N292 157 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 SLC25A45Q8N413 288 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 TMEM217Q8N7C4 229 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF611Q8N823 705 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 ZIC4Q8N9L1 334 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 OR10D4PQ8NGN7 298 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 OR2V1Q8NHB1 315 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 CLDND2Q8NHS1 167 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 PLPPR1Q8TBJ4 325 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 TMEM171Q8WVE6 324 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 EDARADDQ8WWZ3 215 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 DNASE2BQ8WZ79 361 aa3.03□□□□□ -1.92
COL8A1-204ENST00000462604 PIGCQ92535 297 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms