RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SLC25A16P16260 332 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 AMY2BP19961 511 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 AP3S2P59780 193 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 ACTBP60709 375 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 ACTG1P63261 375 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 MEF2CQ06413 473 aaPredicted RBP8.9□□□□□ -0.98
RTF1-202ENST00000462276 GRK1Q15835 563 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 ZNF497Q6ZNH5 498 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 Q6ZS49 121 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 GDPD3Q7L5L3 318 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 MOB1BQ7L9L4 216 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 SNX29P2Q8IUI4 249 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 IZUMO1Q8IYV9 350 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 Q8N402 240 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 ZNF525Q8N782 197 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 ZNF565Q8N9K5 539 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 OR8B3Q8NGG8 313 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 GPX8Q8TED1 209 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 NRGNQ92686 78 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 NEIL1Q96FI4 390 aaPredicted RBP8.9□□□□□ -0.98
RTF1-202ENST00000462276 PERPQ96FX8 193 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 GAFA1Q96PS6 74 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 OR8B2Q96RD0 313 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 CCL13Q99616 98 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 SULT4A1Q9BR01 284 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 SRRQ9GZT4 340 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 SHARPINQ9H0F6 387 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 PATZ1Q9HBE1 687 aaKnown RBP8.9□□□□□ -0.98
RTF1-202ENST00000462276 OR6C3Q9NZP0 311 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 OPN4Q9UHM6 478 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 ITPR2Q14571 2701 aa8.9□□□□□ -0.98
RTF1-202ENST00000462276 FBN2P35556 2912 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 APCP25054 2843 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 TRBV23-1A0A0A0MS06 115 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 TMEM235A6NFC5 223 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 VWC2LB2RUY7 222 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 ZNF205O95201 554 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 MT-ND4P03905 459 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 RPS2P15880 293 aaKnown RBP8.89□□□□□ -0.99
RTF1-202ENST00000462276 TBPP20226 339 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 GZMHP20718 246 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 OR3A1P47881 315 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 PDCD1Q15116 288 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 ZNF79Q15937 498 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 CD276Q5ZPR3 534 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 HIST2H2BCQ6DN03 193 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 TRAT1Q6PIZ9 186 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 ZNRF1Q8ND25 227 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 OR4S1Q8NGB4 309 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 RAB39BQ96DA2 213 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 THAP7Q9BT49 309 aaPredicted RBP8.89□□□□□ -0.99
RTF1-202ENST00000462276 PPA2Q9H2U2 334 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 ZMAT3Q9HA38 289 aaKnown RBP8.89□□□□□ -0.99
RTF1-202ENST00000462276 PALMDQ9NP74 551 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 SLC25A10Q9UBX3 287 aaPredicted RBP8.89□□□□□ -0.99
RTF1-202ENST00000462276 MTFP1Q9UDX5 166 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 AK3Q9UIJ7 227 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 RBMX2Q9Y388 322 aaKnown RBP8.89□□□□□ -0.99
RTF1-202ENST00000462276 POLQO75417 2590 aa8.89□□□□□ -0.99
RTF1-202ENST00000462276 KIR2DS1A0A191URI9 304 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 A0A1W2PPH5 198 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 hADV38S2A0JD32 116 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 UBE2QL1A1L167 161 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 F5H0A9 414 aaPredicted RBP8.88□□□□□ -0.99
RTF1-202ENST00000462276 DVL1O14640 695 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 DIRAS3O95661 229 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 NAT1P18440 290 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 RCVRNP35243 200 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 KIR2DS4P43632 304 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 P2RX3P56373 397 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 KIR2DS1Q14954 304 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 CLEC12BQ2HXU8 276 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 CR1LQ2VPA4 569 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 KRBOX4Q5JUW0 171 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 AVPI1Q5T686 147 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 C6orf183Q5T699 404 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 RSBN1Q5VWQ0 802 aaPredicted RBP8.88□□□□□ -0.99
RTF1-202ENST00000462276 HOGA1Q86XE5 327 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 BPIFB2Q8N4F0 458 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 DTX3Q8N9I9 347 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 C19orf18Q8NEA5 215 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 TMEM185AQ8NFB2 350 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 OR52I2Q8NH67 350 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 BORCS5Q969J3 196 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 FOXC2Q99958 501 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 BPESC1Q9GZL8 116 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 CHMP1AQ9HD42 196 aaPredicted RBP8.88□□□□□ -0.99
RTF1-202ENST00000462276 IFT46Q9NQC8 304 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 KCNIP1Q9NZI2 227 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 CLN8Q9UBY8 286 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 ANAPC10Q9UM13 185 aa8.88□□□□□ -0.99
RTF1-202ENST00000462276 TRGV10A0A0A0MS01 117 aa8.87□□□□□ -0.99
RTF1-202ENST00000462276 ODAMA1E959 279 aa8.87□□□□□ -0.99
RTF1-202ENST00000462276 HSPB6O14558 160 aa8.87□□□□□ -0.99
RTF1-202ENST00000462276 CSF1P09603 554 aa8.87□□□□□ -0.99
RTF1-202ENST00000462276 CTXN2P0C2S0 81 aa8.87□□□□□ -0.99
RTF1-202ENST00000462276 INPP1P49441 399 aa8.87□□□□□ -0.99
RTF1-202ENST00000462276 CEBPDP49716 269 aaPredicted RBP8.87□□□□□ -0.99
RTF1-202ENST00000462276 HOXA4Q00056 320 aaPredicted RBP8.87□□□□□ -0.99
RTF1-202ENST00000462276 TMEM30BQ3MIR4 351 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms