RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 GLAP06280 429 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 HIST1H1DP16402 221 aaKnown RBP11.72□□□□□ -0.53
LINC00887-204ENST00000456816 GNB3P16520 340 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 MNDAP41218 407 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 GZMKP49863 264 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 P2RX3P56373 397 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 RPL31P62899 125 aaKnown RBP11.72□□□□□ -0.53
LINC00887-204ENST00000456816 AESQ08117 197 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 MADCAM1Q13477 382 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 ARFRP1Q13795 201 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 TMEM249Q2WGJ8 235 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 CDNFQ49AH0 187 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 LCE2DQ5TA82 110 aaPredicted RBP11.72□□□□□ -0.53
LINC00887-204ENST00000456816 BIVMQ86UB2 503 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 CIARTQ8N365 385 aaPredicted RBP11.72□□□□□ -0.53
LINC00887-204ENST00000456816 TPRX1Q8N7U7 411 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 LINC01356Q8N9X3 169 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 SULT4A1Q9BR01 284 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 SHARPINQ9H0F6 387 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 ZMAT3Q9HA38 289 aaKnown RBP11.72□□□□□ -0.53
LINC00887-204ENST00000456816 EXTL2Q9UBQ6 330 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 HSF4Q9ULV5 492 aa11.72□□□□□ -0.53
LINC00887-204ENST00000456816 MRPS7Q9Y2R9 242 aaKnown RBP11.72□□□□□ -0.53
LINC00887-204ENST00000456816 MEIKINA0A087WXM9 373 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 TRBV23-1A0A0A0MS06 115 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 ENSAO43768 121 aaKnown RBP11.71□□□□□ -0.53
LINC00887-204ENST00000456816 CSN2P05814 226 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 CD3GP09693 182 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 ZFP36P26651 326 aaKnown RBP11.71□□□□□ -0.53
LINC00887-204ENST00000456816 GLP1RP43220 463 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 GLIPR1P48060 266 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 TMEM50BP56557 158 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 PLAC9Q5JTB6 97 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 RTN4RL2Q86UN3 420 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 PLPPR1Q8TBJ4 325 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 SETD6Q8TBK2 473 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 DIRAS2Q96HU8 199 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 CMSS1Q9BQ75 279 aaKnown RBP11.71□□□□□ -0.53
LINC00887-204ENST00000456816 DCTN5Q9BTE1 182 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 NXF2Q9GZY0 626 aaKnown RBP11.71□□□□□ -0.53
LINC00887-204ENST00000456816 LPAR3Q9UBY5 353 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 AK3Q9UIJ7 227 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 KIF25Q9UIL4 384 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 A3GALT2U3KPV4 340 aa11.71□□□□□ -0.53
LINC00887-204ENST00000456816 TRGV10A0A0A0MS01 117 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 PPIAL4CA0A0B4J2A2 164 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 A0A1W2PPH5 198 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 hADV38S2A0JD32 116 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 MEX3AA1L020 520 aaKnown RBP11.7□□□□□ -0.54
LINC00887-204ENST00000456816 TMEM235A6NFC5 223 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 FOXI3A8MTJ6 420 aaPredicted RBP11.7□□□□□ -0.54
LINC00887-204ENST00000456816 SERPINE3A8MV23 424 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 KIAA1324LA8MWY0 1029 aaPredicted RBP11.7□□□□□ -0.54
LINC00887-204ENST00000456816 A8MXK9 166 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 XRCC3O43542 346 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 CLPXO76031 633 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 MSMBP08118 114 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 PPIAL4GP0DN37 164 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 IGHV4-31P0DP07 118 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 ERP29P30040 261 aaKnown RBP11.7□□□□□ -0.54
LINC00887-204ENST00000456816 TAS2R20P59543 309 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 GNG2P59768 71 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 CYB5R2Q6BCY4 276 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 CNIH2Q6PI25 160 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 BTNL3Q6UXE8 466 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 GLCCI1Q86VQ1 547 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 CCDC107Q8WV48 283 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 COQ2Q96H96 371 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 NUDT16L1Q9BRJ7 211 aaKnown RBP11.7□□□□□ -0.54
LINC00887-204ENST00000456816 MIXL1Q9H2W2 232 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 C19orf12Q9NSK7 152 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 ONECUT1Q9UBC0 465 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 RPUSD1Q9UJJ7 312 aaKnown RBP11.7□□□□□ -0.54
LINC00887-204ENST00000456816 TRAPPC2LQ9UL33 140 aa11.7□□□□□ -0.54
LINC00887-204ENST00000456816 CSMD2Q7Z408 3487 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 ODAMA1E959 279 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 C22orf46C9J442 243 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 MFNGO00587 321 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 CA11O75493 328 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 FCN3O75636 299 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 TGFAP01135 160 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 GSTP1P09211 210 aaKnown RBP11.69□□□□□ -0.54
LINC00887-204ENST00000456816 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
LINC00887-204ENST00000456816 C11orf91Q3C1V1 193 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 RSBN1Q5VWQ0 802 aaPredicted RBP11.69□□□□□ -0.54
LINC00887-204ENST00000456816 OLFML2AQ68BL7 652 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 SPNS3Q6ZMD2 512 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 ZNF497Q6ZNH5 498 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 SNX29P2Q8IUI4 249 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 OR4K15Q8NH41 348 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 MSI2Q96DH6 328 aaKnown RBP11.69□□□□□ -0.54
LINC00887-204ENST00000456816 COX4I2Q96KJ9 171 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 C12orf4Q9NQ89 552 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 PTTG2Q9NZH5 202 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 OR6C3Q9NZP0 311 aa11.69□□□□□ -0.54
LINC00887-204ENST00000456816 TRAV39A0A0B4J263 110 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 TRAV20A0A0B4J274 112 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 IGHV2-70DA0A0C4DH43 119 aa11.68□□□□□ -0.54
LINC00887-204ENST00000456816 LIPFP07098 398 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms