RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 C15orf40Q8WUR7 153 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 NEIL1Q96FI4 390 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 ELF5Q9UKW6 265 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 MALRD1Q5VYJ5 2156 aa13.79□□□□□ -0.2
CCDC90B-202ENST00000455220 MAP1AP78559 2803 aaPredicted RBP13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 DOCK11Q5JSL3 2073 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 UBE2QL1A1L167 161 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 NDUFB3O43676 98 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 IGHV2-5P01817 119 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 LMO4P61968 165 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 MADCAM1Q13477 382 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 IL18Q14116 193 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 ATXN7L3Q14CW9 347 aaPredicted RBP13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 FAM131AQ6UXB0 335 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 NLRC3Q7RTR2 1065 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 OR8B3Q8NGG8 313 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 CLDND2Q8NHS1 167 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 PLPPR1Q8TBJ4 325 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 COQ2Q96H96 371 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 OR8B2Q96RD0 313 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 ABHD1Q96SE0 405 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 NARFLQ9H6Q4 476 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 ETAA1Q9NY74 926 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 SLC25A10Q9UBX3 287 aaPredicted RBP13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 AK3Q9UIJ7 227 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 PCDHB10Q9UN67 800 aa13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 MRPS7Q9Y2R9 242 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-202ENST00000455220 A0A096LNT2 108 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 IGHV4-61A0A0C4DH41 118 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 DVL1O14640 695 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 CTDSPLO15194 276 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 INHBBP09529 407 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 PTHLHP12272 177 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 ERP29P30040 261 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 ZNF45Q02386 682 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 ZNF79Q15937 498 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 LRRC10Q5BKY1 277 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 RSBN1Q5VWQ0 802 aaPredicted RBP13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 ZNF497Q6ZNH5 498 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 NEK7Q8TDX7 302 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 S100ZQ8WXG8 99 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 DYRK2Q92630 601 aa13.77□□□□□ -0.21
CCDC90B-202ENST00000455220 NAPSAO96009 420 aa13.76□□□□□ -0.21
CCDC90B-202ENST00000455220 NPY4RP50391 375 aa13.76□□□□□ -0.21
CCDC90B-202ENST00000455220 PITPNAQ00169 270 aa13.76□□□□□ -0.21
CCDC90B-202ENST00000455220 WDR25Q64LD2 544 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-202ENST00000455220 SLC35E4Q6ICL7 350 aa13.76□□□□□ -0.21
CCDC90B-202ENST00000455220 SNX29P2Q8IUI4 249 aa13.76□□□□□ -0.21
CCDC90B-202ENST00000455220 FGFRL1Q8N441 504 aa13.76□□□□□ -0.21
CCDC90B-202ENST00000455220 NCOR1P1Q9H4R4 102 aa13.76□□□□□ -0.21
CCDC90B-202ENST00000455220 DSCAML1Q8TD84 2053 aa13.76□□□□□ -0.21
CCDC90B-202ENST00000455220 MED13LQ71F56 2210 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 TRBV6-6A0A0A6YYG2 114 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 GPR37O15354 613 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 P2RX3P56373 397 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 SEC61A1P61619 476 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 MRPS10P82664 201 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 AESQ08117 197 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 GDPD3Q7L5L3 318 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 NUDCD2Q8WVJ2 157 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 GCDHQ92947 438 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 RAB39BQ96DA2 213 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 CMSS1Q9BQ75 279 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 RIMS4Q9H426 269 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 SCPEP1Q9HB40 452 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 C12orf4Q9NQ89 552 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 CLN8Q9UBY8 286 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 CREBBPQ92793 2442 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 MEIOCA2RUB1 952 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 POM121CA8CG34 1229 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 SULT1C2O00338 296 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 SSX5O60225 188 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 MT-ND4P03905 459 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 CD3GP09693 182 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 NDUFB7P17568 137 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 USF1P22415 310 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 PRSS3P35030 304 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 GNG2P59768 71 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 ARFRP1Q13795 201 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 C11orf91Q3C1V1 193 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 KRBOX4Q5JUW0 171 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 MRPL30Q8TCC3 161 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 GPX8Q8TED1 209 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 Q96MF0 132 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 HDHD3Q9BSH5 251 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 SRRQ9GZT4 340 aa13.75□□□□□ -0.21
CCDC90B-202ENST00000455220 TMEM30CPA0ZSE6 113 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 FUOMA2VDF0 154 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 A8MXK9 166 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 GABARAPH6UMI1 98 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 H7C1Q1 480 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 DTYMKP23919 212 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 GLIPR1P48060 266 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 EDDM3AQ14507 147 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 ESCO2Q56NI9 601 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 ZNF880Q6PDB4 577 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 Q6ZPA2 131 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 SMIM4Q8WVI0 70 aa13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 SSBP3Q9BWW4 388 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-202ENST00000455220 WDR12Q9GZL7 423 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms