RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 MTCP1P56278 107 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 ZNF121P58317 390 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 ERVFC1-1P60608 527 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 RAP1BP61224 184 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 H3F3AP84243 136 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 EWSR1Q01844 656 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 COTL1Q14019 142 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 ARL6IP1Q15041 203 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 RNPS1Q15287 305 aaKnown RBP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 MS4A18Q3C1V0 323 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 C1orf194Q5T5A4 169 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 SUMO4Q6EEV6 95 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 LANCL3Q6ZV70 420 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 COX15Q7KZN9 410 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 SFTPA1Q8IWL2 248 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 C1orf87Q8N0U7 546 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 FBXL14Q8N1E6 418 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 C10orf53Q8N6V4 93 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 CYB561D1Q8N8Q1 229 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 AVL9Q8NBF6 648 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 CLEC18CQ8NCF0 446 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 ZBTB34Q8NCN2 500 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 OR5D14Q8NGL3 314 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 OR1P1Q8NH06 330 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 OR10J5Q8NHC4 309 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 MFSD8Q8NHS3 518 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 POC1BQ8TC44 478 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 CA5BP1Q8WTZ4 195 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 TMEM170AQ8WVE7 144 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 MBD3L1Q8WWY6 194 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 FGF14Q92915 247 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 RPL36ALQ969Q0 106 aaKnown RBP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 RBMXL1Q96E39 390 aaKnown RBP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 ACY3Q96HD9 319 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 CAPNS2Q96L46 248 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 JSRP1Q96MG2 331 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 SLC46A1Q96NT5 459 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 AGMATQ9BSE5 352 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 URM1Q9BTM9 101 aaKnown RBP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 ABHD14AQ9BUJ0 271 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 SUCNR1Q9BXA5 334 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 TMEM59Q9BXS4 323 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 PECRQ9BY49 303 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 TPSD1Q9BZJ3 242 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 TBL1XR1Q9BZK7 514 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 RTN4RQ9BZR6 473 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 PBOV1Q9GZY1 135 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 CALHM2Q9HA72 323 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 SDF2L1Q9HCN8 221 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 RNF186Q9NXI6 227 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 OBP2AQ9NY56 170 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 CISD1Q9NZ45 108 aaKnown RBP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 LRFN1Q9P244 771 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 OR14J1Q9UGF5 321 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 SERGEFQ9UGK8 458 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 DKKL1Q9UK85 242 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 C14orf166Q9Y224 244 aaKnown RBP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 PTRH2Q9Y3E5 179 aaKnown RBP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 MMACHCQ9Y4U1 282 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 LSM5Q9Y4Y9 91 aaKnown RBP3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 WSB1Q9Y6I7 421 aa3.55□□□□□ -1.84
HMGB3P22-202ENST00000451823 LRP4O75096 1905 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 PTPRSQ13332 1948 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 A0A087WZY1 265 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 A0A0J9YY10 115 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 IGSF23A1L1A6 192 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 FRG2CA6NGY1 282 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 DHRS7CA6NNS2 312 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 HIDE1A8MVS5 230 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 TRDCB7Z8K6 153 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 M0QZK8 103 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 M0R143 59 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 SDCBPO00560 298 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 ST8SIA3O43173 380 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 HCRTR1O43613 425 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 PLRG1O43660 514 aaKnown RBP3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 TRIAP1O43715 76 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 TSPAN2O60636 221 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 YPEL1O60688 119 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 GGCTO75223 188 aaKnown RBP3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 CRTAPO75718 401 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 DFFBO76075 338 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 GOSR1O95249 250 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 UTS2O95399 124 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 CDS2O95674 445 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 HLA-DQA2P01906 255 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 HBE1P02100 147 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 IGKV3-11P04433 115 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 HNRNPA1P09651 372 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 H2BFMP0C1H6 154 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 SPTBP11277 2137 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 SERPINA2P20848 420 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 FUT3P21217 361 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 ANOS1P23352 680 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 DTYMKP23919 212 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 DUSP1P28562 367 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 CCKARP32238 428 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 SFTPDP35247 375 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 APLNRP35414 380 aa3.54□□□□□ -1.84
HMGB3P22-202ENST00000451823 OR3A2P47893 321 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms