RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 FGF12P61328 243 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 KCNJ8Q15842 424 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 BAK1Q16611 211 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 PYHIN1Q6K0P9 492 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 CADM3Q8N126 398 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 FAM58AQ8N1B3 248 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 EMG1Q92979 244 aaKnown RBP14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 UPRTQ96BW1 309 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 SEH1LQ96EE3 360 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 DNAJB11Q9UBS4 358 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 GLS2Q9UI32 602 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 TBC1D24Q9ULP9 559 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 ETV7Q9Y603 341 aa14.1□□□□□ -0.15
PRPF40A-204ENST00000450303 IGKV1-12A0A0C4DH73 117 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 TMEM89A2RUT3 159 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 FCN3O75636 299 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 CRTAPO75718 401 aaPredicted RBP14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 IGKV1D-12P01611 117 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 HLA-DQB1P01920 261 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 ELK1P19419 428 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 BAMBIQ13145 260 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 SMIM21Q3B7S5 101 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 ELP2Q6IA86 826 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 OSR2Q8N2R0 312 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 FGFRL1Q8N441 504 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 OR10K1Q8NGX5 313 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 NRIP2Q9BQI9 281 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 NEURL2Q9BR09 285 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 PCGF1Q9BSM1 259 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 URM1Q9BTM9 101 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 FBLN5Q9UBX5 448 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 RAB22AQ9UL26 194 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 SPATA2Q9UM82 520 aa14.09□□□□□ -0.15
PRPF40A-204ENST00000450303 TENM1Q9UKZ4 2725 aa14.08□□□□□ -0.15
PRPF40A-204ENST00000450303 MDFIC2A0A1B0GVS7 189 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 A0A1B0GW55 424 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 DNAJC9-AS1A6NH13 148 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 H3BUI4 141 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 DVL1O14640 695 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 NDUFA2O43678 99 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 ENSAO43768 121 aaKnown RBP14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 DUX4L2P0CJ85 424 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 DUX4L3P0CJ86 424 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 DUX4L4P0CJ87 422 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 DUX4L5P0CJ88 424 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 DUX4L6P0CJ89 424 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 DUX4L7P0CJ90 424 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 PPIAL4GP0DN37 164 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 VSIG8P0DPA2 414 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 SNRPBP14678 240 aaKnown RBP14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 SPNP16150 400 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 PRKACAP17612 351 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 RAB6AP20340 208 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 NPBWR2P48146 333 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 NPY4RP50391 375 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 ERVK11-1P61568 191 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 MICBQ29980 383 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 TUSC1Q2TAM9 212 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 TEX36Q5VZQ5 186 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 DUX4L9Q6RFH8 374 aaPredicted RBP14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 BRD3OSQ6XYD6 125 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 ACP7Q6ZNF0 438 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 AKAP14Q86UN6 197 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 Q8NFD4 153 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 CHAC2Q8WUX2 184 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 PTX4Q96A99 478 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 C1orf147Q96MC9 270 aaPredicted RBP14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 ZNF488Q96MN9 340 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 CCL13Q99616 98 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 TMEM59Q9BXS4 323 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 DUX4Q9UBX2 424 aa14.08□□□□□ -0.16
PRPF40A-204ENST00000450303 TMEM272A0A1B0GTI8 110 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 LINC00854A0A1B0GVQ3 168 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 METTL21EPA6NDL7 271 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 TMEM14DPA8MWL7 114 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 TMPRSS2O15393 492 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 MPIG6BO95866 241 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 SFTPBP07988 381 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 MUC1P15941 1255 aaPredicted RBP14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 MGMTP16455 207 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 UBE2NLQ5JXB2 153 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 CD276Q5ZPR3 534 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 ZNF57Q68EA5 555 aaPredicted RBP14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 NRARPQ7Z6K4 114 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 LINC00596Q86U02 117 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 OR5T2Q8NGG2 359 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 LGALS14Q8TCE9 139 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 C15orf40Q8WUR7 153 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 ST8SIA4Q92187 359 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 PHF21AQ96BD5 680 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 HES4Q9HCC6 221 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 RBFOX1Q9NWB1 397 aaKnown RBP14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 NLKQ9UBE8 527 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 ANK2Q01484 3957 aa14.07□□□□□ -0.16
PRPF40A-204ENST00000450303 A0A0B4J203 849 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 CENPXA8MT69 81 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 BOLA2-SMG1P6H3BVE0 249 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 PAHP00439 452 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 KNG1P01042 644 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms