RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 FOXJ3Q9UPW0 622 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 ST3GAL6Q9Y274 331 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 TPRKBQ9Y3C4 175 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 TBL2Q9Y4P3 447 aaKnown RBP10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 IGHV2-26A0A0B4J1V2 119 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 A0A1W2PP11 408 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 MAS1P04201 325 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 CGB3P0DN86 165 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 CGB7P0DN87 165 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 SERPINA2P20848 420 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 CDK2P24941 298 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 GDNFP39905 211 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 RAB13P51153 203 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 SRSF4Q08170 494 aaKnown RBP10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 INSL4Q14641 139 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 MED22Q15528 200 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 SSX2Q16385 188 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 C17orf58Q2M2W7 97 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 SLC22A6Q4U2R8 563 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 ACSM3Q53FZ2 586 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 PLA1AQ53H76 456 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 PRAMEF5Q5TYX0 476 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 DHRS7BQ6IAN0 325 aaPredicted RBP10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 HEPN1Q6WQI6 88 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 CDH26Q8IXH8 852 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 JAGN1Q8N5M9 183 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 SGMS2Q8NHU3 365 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 MUL1Q969V5 352 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 CLEC7AQ9BXN2 247 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 GAL3ST2Q9H3Q3 398 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 KIF25Q9UIL4 384 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 RNF114Q9Y508 228 aa10.31□□□□□ -0.76
PRPF40A-203ENST00000448428 VGLL3A8MV65 326 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 GEMIN2O14893 280 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 ZNF780AO75290 641 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 TSPAN9O75954 239 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 CRHBPP24387 322 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 GP2P55259 537 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 RBM11P57052 281 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 NHLRC3Q5JS37 347 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 SLC35E4Q6ICL7 350 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 OR52W1Q6IF63 320 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 LYPD6Q86Y78 171 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 ABHD12Q8N2K0 398 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 MS4A15Q8N5U1 240 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 SUMF2Q8NBJ7 301 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 PLPPR1Q8TBJ4 325 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 WFDC12Q8WWY7 111 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 DPCDQ9BVM2 203 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 BARHL1Q9BZE3 327 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 NCOR1P1Q9H4R4 102 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 C16orf95Q9H693 158 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 IFT22Q9H7X7 185 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 PCDHB16Q9NRJ7 776 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 OR6C3Q9NZP0 311 aa10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 MRPS28Q9Y2Q9 187 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-203ENST00000448428 MEIKINA0A087WXM9 373 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 KBTBD11-OT1A0A1B0GTJ5 212 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 MEGF11A6BM72 1044 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 FAM172BPA6NC97 362 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 ZNF729A6NN14 1252 aaPredicted RBP10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 RGS10O43665 173 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 OR7C1O76099 320 aaPredicted RBP10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 ATP6V1G2O95670 118 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 GTF2F2P13984 249 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 JUNBP17275 347 aaPredicted RBP10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 MAPK3P27361 379 aaPredicted RBP10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 HSPA13P48723 471 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 KRTAP10-3P60369 221 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 PAX5Q02548 391 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 GPR50Q13585 617 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 GPR176Q14439 515 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 FAM189A2Q15884 450 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 UTF1Q5T230 341 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 FAM27D1Q5T7N8 215 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 MINOS1Q5TGZ0 78 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 RSBN1Q5VWQ0 802 aaPredicted RBP10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 BRICD5Q6PL45 260 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 GLIPR1L1Q6UWM5 242 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 ZNF565Q8N9K5 539 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 OR4D6Q8NGJ1 314 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 OR13A1Q8NGR1 328 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 THRSPQ92748 146 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 FOXRED1Q96CU9 486 aaPredicted RBP10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 CNBD2Q96M20 576 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 TMED9Q9BVK6 235 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 HILPDAQ9Y5L2 63 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 MINOS1-NBL1R4GNA1 71 aa10.29□□□□□ -0.76
PRPF40A-203ENST00000448428 TRAV39A0A0B4J263 110 aa10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 CHST1O43916 411 aa10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 HTR1DP28221 377 aa10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 CD34P28906 385 aa10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 KCNJ3P48549 501 aa10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 PROK1P58294 105 aa10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 MPV17LQ2QL34 196 aa10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 LIPKQ5VXJ0 399 aa10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 AWAT2Q6E213 333 aa10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 CCBE1Q6UXH8 406 aaPredicted RBP10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 PRSS48Q7RTY5 328 aa10.28□□□□□ -0.76
PRPF40A-203ENST00000448428 CEACAM19Q7Z692 300 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms