RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ZNF17P17021 662 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 PGCP20142 388 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 GCH1P30793 250 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 HERV-K104P61576 105 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 ATP6V1FQ16864 119 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 CALHM1Q8IU99 346 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 OR5T1Q8NG75 326 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 ANAPC16Q96DE5 110 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 FAM122AQ96E09 287 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 RASL10BQ96S79 203 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 SGIP1Q9BQI5 828 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 ALKBH7Q9BT30 221 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 NXF5Q9H1B4 397 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 VSIRQ9H7M9 311 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 MOB1AQ9H8S9 216 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 MANBALQ9NQG1 85 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF319Q9P2F9 582 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 A0A0U1RQK1 487 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 A0A1W2PQ45 241 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 A0A1W2PQY0 241 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF320A2RRD8 509 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 CHST1O43916 411 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 TMEM50AO95807 157 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 TYMSP04818 313 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 TMEM11P17152 192 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 IL11P20809 199 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 FUT7Q11130 342 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 PRDX4Q13162 271 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 GPM6BQ13491 265 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 TPTE2P1Q5T6R2 138 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 UEVLDQ8IX04 471 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 ODF3L1Q8IXM7 274 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 BAHD1Q8TBE0 780 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 MOB3AQ96BX8 217 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF845Q96IR2 970 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 SLC46A1Q96NT5 459 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 TM2D1Q9BX74 207 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 PATZ1Q9HBE1 687 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 XIRP2A4UGR9 3374 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 C3orf85A0A1B0GTC6 90 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 ADAM20O43506 726 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 POU3F1Q03052 451 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 CENPVQ7Z7K6 275 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 STPG4Q8N801 248 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 MBD3L1Q8WWY6 194 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 OIT3Q8WWZ8 545 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 ASB10Q8WXI3 467 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 ELSPBP1Q96BH3 223 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF286AQ9HBT8 521 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF581Q9P0T4 197 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 H3BP45 60 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 TCN2P20062 427 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 SRP14P37108 136 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 WASP42768 502 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF133P52736 654 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 TPPP2P59282 170 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 SRPXP78539 464 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 TESK1Q15569 626 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF726P1Q15940 193 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 Q6ZWC4 215 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 DOK3Q7L591 496 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 CCL4L1Q8NHW4 92 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 ORAOV1Q8WV07 137 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 LIN37Q96GY3 246 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 CCDC74BQ96LY2 380 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 GABRG3Q99928 467 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 AGMATQ9BSE5 352 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 EMC6Q9BV81 110 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 K7EP13 123 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 HCRTR1O43613 425 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 CTSBP07858 339 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 OR1D4P47884 311 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 DAP3P51398 398 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 WDFY1Q8IWB7 410 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 KCNK17Q96T54 332 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 APOOQ9BUR5 198 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 GSX1Q9H4S2 264 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 PLA2G3Q9NZ20 509 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 SERGEFQ9UGK8 458 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 GON4LQ3T8J9 2241 aa8.16□□□□□ -1.1
SYNPO2-204ENST00000448416 A0A1W2PP55 124 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 MPPED1O15442 326 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 NDUFB8O95169 186 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 UBE2NP61088 152 aaKnown RBP8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 MEF2BQ02080 365 aaPredicted RBP8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 PRTGQ2VWP7 1150 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 FAM78BQ5VT40 261 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 LILRA6Q6PI73 481 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 SMIM15Q7Z3B0 74 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 LYG1Q8N1E2 194 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF709Q8N972 641 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 LRRC3BQ96PB8 259 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 HSPB9Q9BQS6 159 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF552Q9H707 407 aaPredicted RBP8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 ANKUB1A6NFN9 424 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 CCDC85CA6NKD9 419 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 YPEL1O60688 119 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 NPIPB7O75200 414 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 IL3RAP26951 378 aa8.15□□□□□ -1.1
SYNPO2-204ENST00000448416 CHRNA7P36544 502 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms