RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 INPP5EQ9NRR6 644 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 SLC7A10Q9NS82 523 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 PTTG3PQ9NZH4 202 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 OR1A1Q9P1Q5 309 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 NUFIP1Q9UHK0 495 aaKnown RBP3.17□□□□□ -1.9
VPS29-202ENST00000447578 SLC35A3Q9Y2D2 325 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 KCNIP3Q9Y2W7 256 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 IER3IP1Q9Y5U9 82 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 DENND4AQ7Z401 1863 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 KIF26AQ9ULI4 1882 aaPredicted RBP3.17□□□□□ -1.9
VPS29-202ENST00000447578 UTRNP46939 3433 aa3.17□□□□□ -1.9
VPS29-202ENST00000447578 A0A087WUJ7 227 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 IGHV1OR15-9A0A0B4J2B8 117 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 A0A0G2JMP0 313 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 TRBV11-1A0A0K0K1C0 115 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 A0A0X1KG70 313 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 A0A1B0GTQ1 180 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 A0A1W2PRG6 482 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 TUBAL3A6NHL2 446 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 A6NIN4 97 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 OR5B21A6NL26 309 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 CENPXA8MT69 81 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 A8MUA0 341 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 C10orf142B7Z368 130 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 LRRN3E7EW58 273 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 DCTN6O00399 190 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 MAGEB4O15481 346 aaPredicted RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 ZNF253O75346 499 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 ZNF254O75437 659 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 OR2J3O76001 311 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 OR7A10O76100 309 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 NSA2O95478 260 aaKnown RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 IGLV3-19P01714 112 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 EIF4EP06730 217 aaKnown RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 GUSBP08236 651 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 TRAPPC2P0DI81 140 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 TRAPPC2BP0DI82 140 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 PSKH1P11801 424 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 IL9P15248 144 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 HPGDP15428 266 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 HIST1H1CP16403 213 aaKnown RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 ELK1P19419 428 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 SLC2A5P22732 501 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 CFL1P23528 166 aaKnown RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 IL2RGP31785 369 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 PYCR1P32322 319 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 RCVRNP35243 200 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 TALDO1P37837 337 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 NAA10P41227 235 aaPredicted RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 KIR2DS2P43631 304 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 EVX1P49640 407 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 GDI2P50395 445 aaKnown RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 GFERP55789 205 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 BIDP55957 195 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 KRTAP12-2P59991 146 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 ERVK-25P63136 954 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 IGLV3-21P80748 117 aaPredicted RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 IFITM2Q01629 132 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 OR5I1Q13606 314 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 ARL6IP1Q15041 203 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 PON3Q15166 354 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 SF3A2Q15428 464 aaKnown RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 TGIF1Q15583 401 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 MRPL23Q16540 153 aaKnown RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 ACSM3Q53FZ2 586 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 FAM27D1Q5T7N8 215 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 SLC22A10Q63ZE4 541 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 HBMQ6B0K9 141 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 TMEM53Q6P2H8 277 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 SSX6Q7RTT6 188 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 GKN2Q86XP6 184 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 RDH10Q8IZV5 341 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 SLC7A5P1Q8MH63 180 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 Q8N402 240 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 OR4M2Q8NGB6 313 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 OR4M1Q8NGD0 313 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 OR51L1Q8NGJ5 315 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 OR2T27Q8NH04 317 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 OR51Q1Q8NH59 317 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 ZPLD1Q8TCW7 415 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 ACOT12Q8WYK0 555 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 GHSRQ92847 366 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 ZMYND19Q96E35 227 aaPredicted RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 MSANTD3Q96H12 275 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 NMNAT3Q96T66 252 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 CTRCQ99895 268 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 GAL3ST1Q99999 423 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 SOSTQ9BQB4 213 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 PELOQ9BRX2 385 aaKnown RBP3.16□□□□□ -1.9
VPS29-202ENST00000447578 ZNF426Q9BUY5 554 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 BEX2Q9BXY8 128 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 SRXN1Q9BYN0 137 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 KLHL21Q9UJP4 597 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 C2orf16Q68DN1 1984 aa3.16□□□□□ -1.9
VPS29-202ENST00000447578 PCM1Q15154 2024 aa3.15□□□□□ -1.9
VPS29-202ENST00000447578 PLXND1Q9Y4D7 1925 aa3.15□□□□□ -1.9
VPS29-202ENST00000447578 IGKV1D-42A0A075B6H8 117 aa3.15□□□□□ -1.91
VPS29-202ENST00000447578 IGHV5-51A0A0C4DH38 117 aa3.15□□□□□ -1.91
VPS29-202ENST00000447578 EEF1E1O43324 174 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms