RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-203	ENST00000447540	LBX2	Q6XYB7	198 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	TRAPPC6B	Q86SZ2	158 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	OR1N2	Q8NGR9	330 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	OR51H1	Q8NH63	302 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	HSD17B8	Q92506	261 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	ANAPC13	Q9BS18	74 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SDF2L1	Q9HCN8	221 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	UTS2R	Q9UKP6	389 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540		A0A1W2PQM1	296 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	C5orf49	A4QMS7	147 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540		H3BRM9	83 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SIVA1	O15304	175 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	FOXH1	O75593	365 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	H2BFM	P0C1H6	154 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SLC25A6	P12236	298 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	FKBP2	P26885	142 aa	Known RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	CRYBB3	P26998	211 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	GAGE2B	Q13066	116 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	GAGE2E	Q4V326	116 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	LY6G6F	Q5SQ64	297 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	AADACL3	Q5VUY0	350 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	CENPV	Q7Z7K6	275 aa	Predicted RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	OR51E1	Q8TCB6	317 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	KCNK15	Q9H427	330 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	EGLN3	Q9H6Z9	239 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	PELI2	Q9HAT8	420 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	ANKRD10	Q9NXR5	420 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	C1RL	Q9NZP8	487 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	GAGE2D	Q9UEU5	116 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SMIM30	A4D0T7	59 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	ATXN7	O15265	892 aa	Predicted RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	CHST1	O43916	411 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	IGLC2	P0DOY2	106 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	IGLC3	P0DOY3	106 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	PRDX3	P30048	256 aa	Known RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	CA7	P43166	264 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	RAB9A	P51151	201 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	OR1D5	P58170	312 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	FKBP1B	P68106	108 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	TMEM240	Q5SV17	173 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	CDC20B	Q86Y33	519 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SGK494	Q96LW2	274 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	UBTD1	Q9HAC8	227 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SIGLEC8	Q9NYZ4	499 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	GPR132	Q9UNW8	380 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	NYNRIN	Q9P2P1	1898 aa	Known RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	ABCA3	Q99758	1704 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540		A0A1B0GW15	77 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	KLRG2	A4D1S0	409 aa	Predicted RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	PTGES	O14684	152 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	TNFRSF10C	O14798	259 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	POU2F2	P09086	479 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	TIMP3	P35625	211 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	PSMB10	P40306	273 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	PDX1	P52945	283 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	UCP3	P55916	312 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	YPEL3	P61236	119 aa	Predicted RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	MRPS6	P82932	125 aa	Known RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	MELK	Q14680	651 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SP8	Q8IXZ3	490 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	LYG1	Q8N1E2	194 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	ASB10	Q8WXI3	467 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	GNB1L	Q9BYB4	327 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	PRRC2A	P48634	2157 aa	Known RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	STRCP1	A6NGW2	1772 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	EDN1	P05305	212 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	AOAH	P28039	575 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SLC10A6	Q3KNW5	377 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	ACTL10	Q5JWF8	245 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	LINC00696	Q6ZRV3	163 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	OR8I2	Q8N0Y5	310 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	FBXL14	Q8N1E6	418 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	OR1L6	Q8NGR2	347 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	ZNF563	Q8TA94	476 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	C8orf46	Q8TAG6	207 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SSBP3	Q9BWW4	388 aa	Predicted RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	EBPL	Q9BY08	206 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	LPAR5	Q9H1C0	372 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	LANCL2	Q9NS86	450 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	PSMB11	A5LHX3	300 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	OR2W5	A6NFC9	320 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	FAM24A	A6NFZ4	105 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SNRPC	P09234	159 aa	Known RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	HIST1H1E	P10412	219 aa	Known RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	HCFC1	P51610	2035 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	CCDC144NL	Q6NUI1	221 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	FAM57B	Q71RH2	274 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	OLIG3	Q7RTU3	272 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	OR6N2	Q8NGY6	317 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	2.58	□□□□□ -2
CHD9-203	ENST00000447540	APIP	Q96GX9	242 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SLC6A18	Q96N87	628 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	DIRC2	Q96SL1	478 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	FAM110A	Q9BQ89	295 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	COMMD5	Q9GZQ3	224 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	GPR52	Q9Y2T5	361 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	SLC31A1	O15431	190 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	UTS2	O95399	124 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	CD46	P15529	392 aa		2.58	□□□□□ -2
CHD9-203	ENST00000447540	CD22	P20273	847 aa		2.58	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms