RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 OR2A5Q96R48 311 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 OR51B6Q9H340 312 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 HSBP1O75506 76 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 MST1P26927 711 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 ZNF547Q8IVP9 402 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 BAHD1Q8TBE0 780 aaPredicted RBP6.95□□□□□ -1.3
SMG1-202ENST00000446231 FRG2CA6NGY1 282 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 PNLIPP16233 465 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 NHLRC2Q8NBF2 726 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 GLB1P16278 677 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 HELTA6NFD8 242 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 ZNF17P17021 662 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 GAPTQ8N292 157 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 OR4C3Q8NH37 302 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 OR4X1Q8NH49 305 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 ZNRF4Q8WWF5 429 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 FGF14Q92915 247 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 RGPD5Q99666 1765 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 NKX2-2O95096 273 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 CEBPBP17676 345 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 PDCD1Q15116 288 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 OR5D13Q8NGL4 314 aa6.95□□□□□ -1.3
SMG1-202ENST00000446231 ZIC2O95409 532 aaPredicted RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 COX5BP10606 129 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 PLP1P60201 277 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 PP6455Q8WZ26 134 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 TMEM229AB2RXF0 380 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 TMEM208Q9BTX3 173 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 CHST5Q9GZS9 411 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 OBP2BQ9NPH6 170 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 KIF13BQ9NQT8 1826 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 CASP8AP2Q9UKL3 1982 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 TCL1AP56279 114 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 C6orf201Q7Z4U5 140 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 SH2D1BO14796 132 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 LINC00614P0C842 121 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 MDH2P40926 338 aaKnown RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 FMODQ06828 376 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 OR5B3Q8NH48 314 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 Q8WTZ3 238 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 ABHD14BQ96IU4 210 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 DUX1O43812 170 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 HLA-GP17693 338 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 ALG14Q96F25 216 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 MRPS2Q9Y399 296 aaKnown RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 KLF3P57682 345 aaPredicted RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 NUFIP2Q7Z417 695 aaKnown RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 TET1Q8NFU7 2136 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 ZNF253O75346 499 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 FUT7Q11130 342 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 SHHQ15465 462 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 OSR2Q8N2R0 312 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 SMIM12Q96EX1 92 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 FOXQ1Q9C009 403 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 ZNF142P52746 1687 aaPredicted RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 SERTM2A0A1B0GWG4 89 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 EIF4EBP2Q13542 120 aaPredicted RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 ATG4DQ86TL0 474 aaPredicted RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 H3BP45 60 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 GPM6AP51674 278 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 BCL2L2Q92843 193 aaPredicted RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 CTXND1A0A1B0GTU2 59 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 ZNF205O95201 554 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 HOXC4P09017 264 aaPredicted RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 PTGER4P35408 488 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 PPOXP50336 477 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 COL10A1Q03692 680 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 OR2W5A6NFC9 320 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 MYBPHQ13203 477 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 OR4A4PQ8NGN8 299 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 RARRES3Q9UL19 164 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 COL22A1Q8NFW1 1626 aaPredicted RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 PDCD6O75340 191 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 ICAM4Q14773 271 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 CD160O95971 181 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 FABP2P12104 132 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 OR2A1Q8NGT9 310 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 MUCL1Q96DR8 90 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 ADAT3Q96EY9 351 aaPredicted RBP6.94□□□□□ -1.3
SMG1-202ENST00000446231 GPR132Q9UNW8 380 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 PIAS3Q9Y6X2 628 aa6.94□□□□□ -1.3
SMG1-202ENST00000446231 RNF222A6NCQ9 220 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 C1orf194Q5T5A4 169 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 SLC25A43Q8WUT9 341 aaPredicted RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 FAM234AQ9H0X4 552 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 ERRFI1Q9UJM3 462 aaPredicted RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 CRYABP02511 175 aaKnown RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 VWA1Q6PCB0 445 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 CLDND2Q8NHS1 167 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 A8MWP6 167 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 HAND1O96004 215 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 SELENOVP59797 346 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 NTSR1P30989 418 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 PPP1CCP36873 323 aaKnown RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 LTC4SQ16873 150 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 TGIF2LYQ8IUE0 185 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 LAMB1P07942 1786 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 TMEM265A0A087WTH1 108 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 A0A1B0GWJ7 208 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 IGHV2-70P01814 119 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms