RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 STX19Q8N4C7 294 aa16.19■□□□□ 0.18
LRCH3-208ENST00000443727 KLHDC1Q8N7A1 406 aa16.19■□□□□ 0.18
LRCH3-208ENST00000443727 ZNF565Q8N9K5 539 aa16.19■□□□□ 0.18
LRCH3-208ENST00000443727 OR51T1Q8NGJ9 327 aa16.19■□□□□ 0.18
LRCH3-208ENST00000443727 OR13C5Q8NGS8 318 aa16.19■□□□□ 0.18
LRCH3-208ENST00000443727 BARHL1Q9BZE3 327 aa16.19■□□□□ 0.18
LRCH3-208ENST00000443727 PPIL3Q9H2H8 161 aaKnown RBP16.19■□□□□ 0.18
LRCH3-208ENST00000443727 DPM3Q9P2X0 92 aa16.19■□□□□ 0.18
LRCH3-208ENST00000443727 ZNF729A6NN14 1252 aaPredicted RBP16.18■□□□□ 0.18
LRCH3-208ENST00000443727 ANKRD65E5RJM6 399 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 JUNBP17275 347 aaPredicted RBP16.18■□□□□ 0.18
LRCH3-208ENST00000443727 NFYBP25208 207 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 GLP1RP43220 463 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 ARHGDIBP52566 201 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 Q499Y3 187 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 YIF1BQ5BJH7 314 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 DMKNQ6E0U4 476 aaPredicted RBP16.18■□□□□ 0.18
LRCH3-208ENST00000443727 CCBE1Q6UXH8 406 aaPredicted RBP16.18■□□□□ 0.18
LRCH3-208ENST00000443727 C11orf44Q8N8P7 122 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 OR4P4Q8NGL7 312 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 ORAI1Q96D31 301 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 PAK1IP1Q9NWT1 392 aaPredicted RBP16.18■□□□□ 0.18
LRCH3-208ENST00000443727 CNOT2Q9NZN8 540 aaKnown RBP16.18■□□□□ 0.18
LRCH3-208ENST00000443727 KIF25Q9UIL4 384 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 FOXJ3Q9UPW0 622 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 WNK1Q9H4A3 2382 aa16.18■□□□□ 0.18
LRCH3-208ENST00000443727 TRAV24A0A0B4J272 114 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 PNMA8CA0A1B0GUJ8 204 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 LEUTXA8MZ59 168 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 MYL12BO14950 172 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 XPNPEP2O43895 674 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 PEX14O75381 377 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 BRS3P32247 399 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 CEACAM3P40198 252 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 PRRX1P54821 245 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 TAS2R43P59537 309 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 BDH1Q02338 343 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 RBM39Q14498 530 aaKnown RBP16.17■□□□□ 0.18
LRCH3-208ENST00000443727 ASCL4Q6XD76 172 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 AHSA2Q719I0 299 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 BPIFB6Q8NFQ5 453 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 FAM110DQ8TAY7 271 aaPredicted RBP16.17■□□□□ 0.18
LRCH3-208ENST00000443727 CAPSLQ8WWF8 208 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 CREB3L1Q96BA8 519 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 PRSS22Q9GZN4 317 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 ZNF286AQ9HBT8 521 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 ST3GAL6Q9Y274 331 aa16.17■□□□□ 0.18
LRCH3-208ENST00000443727 TRBV5-5A0A0J9YX44 114 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 KBTBD11-OT1A0A1B0GTJ5 212 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 CASQ2O14958 399 aaPredicted RBP16.16■□□□□ 0.18
LRCH3-208ENST00000443727 OR7C1O76099 320 aaPredicted RBP16.16■□□□□ 0.18
LRCH3-208ENST00000443727 TSPAN15O95858 294 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 CSF1P09603 554 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 SERPINA2P20848 420 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 C21orf33P30042 268 aaPredicted RBP16.16■□□□□ 0.18
LRCH3-208ENST00000443727 GDNFP39905 211 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 OSR2Q8N2R0 312 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 ZNF184Q99676 751 aaPredicted RBP16.16■□□□□ 0.18
LRCH3-208ENST00000443727 ZNF702PQ9H963 129 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 PCDHB16Q9NRJ7 776 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 PSORS1C1Q9UIG5 152 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 KIAA2026Q5HYC2 2103 aa16.16■□□□□ 0.18
LRCH3-208ENST00000443727 WIPF1O43516 503 aa16.15■□□□□ 0.18
LRCH3-208ENST00000443727 CD34P28906 385 aa16.15■□□□□ 0.18
LRCH3-208ENST00000443727 KCNJ3P48549 501 aa16.15■□□□□ 0.18
LRCH3-208ENST00000443727 HABP2Q14520 560 aaPredicted RBP16.15■□□□□ 0.18
LRCH3-208ENST00000443727 C17orf58Q2M2W7 97 aa16.15■□□□□ 0.18
LRCH3-208ENST00000443727 SUMF2Q8NBJ7 301 aa16.15■□□□□ 0.18
LRCH3-208ENST00000443727 Q8NFD4 153 aa16.15■□□□□ 0.18
LRCH3-208ENST00000443727 OR14A2Q96R54 314 aa16.15■□□□□ 0.18
LRCH3-208ENST00000443727 DPCDQ9BVM2 203 aaPredicted RBP16.15■□□□□ 0.18
LRCH3-208ENST00000443727 CALYQ9NYX4 217 aa16.15■□□□□ 0.18
LRCH3-208ENST00000443727 IL36GQ9NZH8 169 aa16.15■□□□□ 0.18
LRCH3-208ENST00000443727 VWFP04275 2813 aa16.15■□□□□ 0.18
LRCH3-208ENST00000443727 A0A1W2PPK0 400 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 ZNF780AO75290 641 aaPredicted RBP16.14■□□□□ 0.17
LRCH3-208ENST00000443727 IGLV1-47P01700 117 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 IGFBP3P17936 291 aaPredicted RBP16.14■□□□□ 0.17
LRCH3-208ENST00000443727 RBM11P57052 281 aaKnown RBP16.14■□□□□ 0.17
LRCH3-208ENST00000443727 DEFA6Q01524 100 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 SLC22A6Q4U2R8 563 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 JAGN1Q8N5M9 183 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 ZNF485Q8NCK3 441 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 OR13A1Q8NGR1 328 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 PGLYRP3Q96LB9 341 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 NCOR1P1Q9H4R4 102 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 DCLRE1BQ9H816 532 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 PLCXD1Q9NUJ7 323 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 ERGIC3Q9Y282 383 aa16.14■□□□□ 0.17
LRCH3-208ENST00000443727 TRAV8-7A0A075B6U6 113 aa16.13■□□□□ 0.17
LRCH3-208ENST00000443727 MEGF11A6BM72 1044 aa16.13■□□□□ 0.17
LRCH3-208ENST00000443727 FAM90A22PA8MWA6 464 aa16.13■□□□□ 0.17
LRCH3-208ENST00000443727 BUB1B-PAK6H3BSN5 160 aa16.13■□□□□ 0.17
LRCH3-208ENST00000443727 GEMIN2O14893 280 aaKnown RBP16.13■□□□□ 0.17
LRCH3-208ENST00000443727 GTF2F2P13984 249 aa16.13■□□□□ 0.17
LRCH3-208ENST00000443727 CELP19835 753 aa16.13■□□□□ 0.17
LRCH3-208ENST00000443727 CD24P25063 80 aa16.13■□□□□ 0.17
LRCH3-208ENST00000443727 WNT4P56705 351 aa16.13■□□□□ 0.17
LRCH3-208ENST00000443727 RPS11P62280 158 aaKnown RBP eCLIP16.13■□□□□ 0.17
LRCH3-208ENST00000443727 GPR176Q14439 515 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms