RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 DNHD1Q96M86 4753 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 PHIPQ8WWQ0 1821 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 RIC1Q4ADV7 1423 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 ANKRD50Q9ULJ7 1429 aa1.82□□□□□ -2.12
VPS41-207ENST00000439468 ATG2AQ2TAZ0 1938 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 SCN9AQ15858 1988 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 DOCK3Q8IZD9 2030 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 PRRC2BQ5JSZ5 2229 aaKnown RBP1.81□□□□□ -2.12
VPS41-207ENST00000439468 A0A1B0GUL6 1792 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 FAM240AA0A1B0GVK7 77 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 ZNF233A6NK53 670 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 A8MWL6 223 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 PRAMEF26H0Y7S4 382 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 MFNGO00587 321 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 RFXANKO14593 260 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 OR7C2O60412 319 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 MAS1P04201 325 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 SEC11BP0C7V7 166 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 CCL5P13501 91 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 C2orf54Q08AI8 447 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 MAD2L1BPQ15013 274 aaPredicted RBP1.81□□□□□ -2.12
VPS41-207ENST00000439468 HNRNPA1L2Q32P51 320 aaKnown RBP1.81□□□□□ -2.12
VPS41-207ENST00000439468 TTC32Q5I0X7 151 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 APOBEC3HQ6NTF7 200 aaKnown RBP1.81□□□□□ -2.12
VPS41-207ENST00000439468 FAM131AQ6UXB0 335 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 TMEM136Q6ZRR5 245 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 PRNTQ86SH4 94 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 ITPRIPQ8IWB1 547 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 LYPD1Q8N2G4 141 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 LINC00337Q8N6G1 96 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 APCDD1LQ8NCL9 501 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 KLF14Q8TD94 323 aaPredicted RBP1.81□□□□□ -2.12
VPS41-207ENST00000439468 FXYD5Q96DB9 178 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 LRRC39Q96DD0 335 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 SMARCD1Q96GM5 515 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 TSNAXQ99598 290 aaKnown RBP1.81□□□□□ -2.12
VPS41-207ENST00000439468 LZTFL1Q9NQ48 299 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 FLT4P35916 1363 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 EIF3AQ14152 1382 aaKnown RBP1.81□□□□□ -2.12
VPS41-207ENST00000439468 CD163L1Q9NR16 1453 aa1.81□□□□□ -2.12
VPS41-207ENST00000439468 PLXNB2O15031 1838 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 ECM29Q5VYK3 1845 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 ZFHX3Q15911 3703 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 A0A0G2JMP0 313 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 A0A0X1KG70 313 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 ANKRD20A5PA0PJZ0 165 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.8□□□□□ -2.12
VPS41-207ENST00000439468 CLDN34H7C241 214 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 H7C2Y5 167 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 ENSAO43768 121 aaKnown RBP1.8□□□□□ -2.12
VPS41-207ENST00000439468 SC5DO75845 299 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 RNASE2P10153 161 aaKnown RBP1.8□□□□□ -2.12
VPS41-207ENST00000439468 ADIGQ0VDE8 80 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 IL15RAQ13261 267 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 PMVKQ15126 192 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 ZNF678Q5SXM1 525 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 THOC7Q6I9Y2 204 aaKnown RBP1.8□□□□□ -2.12
VPS41-207ENST00000439468 MORN3Q6PF18 240 aaPredicted RBP1.8□□□□□ -2.12
VPS41-207ENST00000439468 C16orf47Q6ZP98 133 aaPredicted RBP1.8□□□□□ -2.12
VPS41-207ENST00000439468 DAZ4Q86SG3 579 aaKnown RBP1.8□□□□□ -2.12
VPS41-207ENST00000439468 SETD3Q86TU7 594 aaPredicted RBP1.8□□□□□ -2.12
VPS41-207ENST00000439468 SGPP2Q8IWX5 399 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 ATPAF2Q8N5M1 289 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 OR4K2Q8NGD2 314 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 SFXN5Q8TD22 340 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 ANGPTL4Q9BY76 406 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 PRRG3Q9BZD7 231 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 TM6SF2Q9BZW4 377 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 LHX5Q9H2C1 402 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 DAZ1Q9NQZ3 744 aaKnown RBP1.8□□□□□ -2.12
VPS41-207ENST00000439468 BZW2Q9Y6E2 419 aaKnown RBP1.8□□□□□ -2.12
VPS41-207ENST00000439468 DMXL2Q8TDJ6 3036 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 COL12A1Q99715 3063 aa1.8□□□□□ -2.12
VPS41-207ENST00000439468 THADAQ6YHU6 1953 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 AKAP13Q12802 2813 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 A0A0J9YYE9 177 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 TMEM72A0PK05 275 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 VGLL3A8MV65 326 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 SEC14L6B5MCN3 397 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 ALOX12BO75342 701 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 TRBC1P01850 177 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 RHOCP08134 193 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 PRSS3P35030 304 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 P2RY2P41231 377 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 IDH2P48735 452 aaKnown RBP1.79□□□□□ -2.12
VPS41-207ENST00000439468 BTN1A1Q13410 526 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 FBXL19-AS1Q494R0 122 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 HSP90AA4PQ58FG1 418 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 CYP4Z2PQ8N1L4 340 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 OR13C9Q8NGT0 318 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 FAM57AQ8TBR7 257 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 MITD1Q8WV92 249 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 ZNF75CPQ92670 426 aaPredicted RBP1.79□□□□□ -2.12
VPS41-207ENST00000439468 TNFRSF14Q92956 283 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 YIPF6Q96EC8 236 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 MRPL48Q96GC5 212 aaKnown RBP1.79□□□□□ -2.12
VPS41-207ENST00000439468 SMIM8Q96KF7 97 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 SPACA5Q96QH8 159 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 METTL26Q96S19 204 aa1.79□□□□□ -2.12
VPS41-207ENST00000439468 SHANK2-AS3Q9BTD1 123 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms