RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CHMP1AQ9HD42 196 aaPredicted RBP17.25■□□□□ 0.35
CHD3-204ENST00000439235 ELF5Q9UKW6 265 aaPredicted RBP17.25■□□□□ 0.35
CHD3-204ENST00000439235 PCDHB10Q9UN67 800 aa17.25■□□□□ 0.35
CHD3-204ENST00000439235 MYO9AB2RTY4 2548 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 UTP20O75691 2785 aaKnown RBP17.24■□□□□ 0.35
CHD3-204ENST00000439235 FUOMA2VDF0 154 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 DTYMKP23919 212 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 PAX5Q02548 391 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 GUCA2AQ02747 115 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 LRRC10Q5BKY1 277 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 RNASE12Q5GAN4 147 aaKnown RBP17.24■□□□□ 0.35
CHD3-204ENST00000439235 LYPD2Q6UXB3 125 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 GDPD3Q7L5L3 318 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 OR8B3Q8NGG8 313 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 GPX8Q8TED1 209 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 DYRK2Q92630 601 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 NEIL1Q96FI4 390 aaPredicted RBP17.24■□□□□ 0.35
CHD3-204ENST00000439235 OR8B2Q96RD0 313 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 SHARPINQ9H0F6 387 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 CTSZQ9UBR2 303 aa17.24■□□□□ 0.35
CHD3-204ENST00000439235 SLC25A10Q9UBX3 287 aaPredicted RBP17.24■□□□□ 0.35
CHD3-204ENST00000439235 A0A1B0GW55 424 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 TMEM30CPA0ZSE6 113 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 POM121CA8CG34 1229 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 J3QRK9 145 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 DUX4L2P0CJ85 424 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 DUX4L3P0CJ86 424 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 DUX4L4P0CJ87 422 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 DUX4L5P0CJ88 424 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 DUX4L6P0CJ89 424 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 DUX4L7P0CJ90 424 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 SELLP14151 372 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 DGCR2P98153 550 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 SSBP1Q04837 148 aaKnown RBP17.23■□□□□ 0.35
CHD3-204ENST00000439235 SLC35E4Q6ICL7 350 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 DUX4L9Q6RFH8 374 aaPredicted RBP17.23■□□□□ 0.35
CHD3-204ENST00000439235 DNM1P46Q6ZS02 220 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 OR52I2Q8NH67 350 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 PLPPR1Q8TBJ4 325 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 CYYR1Q96J86 154 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 IFT46Q9NQC8 304 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 DUX4Q9UBX2 424 aa17.23■□□□□ 0.35
CHD3-204ENST00000439235 MEIOCA2RUB1 952 aa17.22■□□□□ 0.35
CHD3-204ENST00000439235 SSX5O60225 188 aa17.22■□□□□ 0.35
CHD3-204ENST00000439235 ACTBP60709 375 aa17.22■□□□□ 0.35
CHD3-204ENST00000439235 ACTG1P63261 375 aa17.22■□□□□ 0.35
CHD3-204ENST00000439235 EDDM3AQ14507 147 aa17.22■□□□□ 0.35
CHD3-204ENST00000439235 CLEC12BQ2HXU8 276 aa17.22■□□□□ 0.35
CHD3-204ENST00000439235 KRBOX4Q5JUW0 171 aa17.22■□□□□ 0.35
CHD3-204ENST00000439235 RSBN1Q5VWQ0 802 aaPredicted RBP17.22■□□□□ 0.35
CHD3-204ENST00000439235 TRIQKQ629K1 86 aa17.22■□□□□ 0.35
CHD3-204ENST00000439235 ZNF497Q6ZNH5 498 aa17.22■□□□□ 0.35
CHD3-204ENST00000439235 BORCS5Q969J3 196 aa17.22■□□□□ 0.35
CHD3-204ENST00000439235 SDHCQ99643 169 aaPredicted RBP17.22■□□□□ 0.35
CHD3-204ENST00000439235 HDHD3Q9BSH5 251 aaPredicted RBP17.22■□□□□ 0.35
CHD3-204ENST00000439235 THAP7Q9BT49 309 aaPredicted RBP17.22■□□□□ 0.35
CHD3-204ENST00000439235 PATZ1Q9HBE1 687 aaKnown RBP17.22■□□□□ 0.35
CHD3-204ENST00000439235 VWC2LB2RUY7 222 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 DVL1O14640 695 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 RBBP9O75884 186 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 NAPSAO96009 420 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 FCGR3AP08637 254 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 NDUFB7P17568 137 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 ERP29P30040 261 aaKnown RBP17.21■□□□□ 0.35
CHD3-204ENST00000439235 RCVRNP35243 200 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 INPP1P49441 399 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 P2RX3P56373 397 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 AESQ08117 197 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 MOB1BQ7L9L4 216 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 GAPTQ8N292 157 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 COQ2Q96H96 371 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 OCSTAMPQ9BR26 566 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 NARFLQ9H6Q4 476 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 ING3Q9NXR8 418 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 MTFP1Q9UDX5 166 aa17.21■□□□□ 0.35
CHD3-204ENST00000439235 TRBV6-6A0A0A6YYG2 114 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 MEIS3P1A6NDR6 274 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 F5H0A9 414 aaPredicted RBP17.2■□□□□ 0.34
CHD3-204ENST00000439235 GPR37O15354 613 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 WNT2P09544 360 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 IL7P13232 177 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 SLC25A16P16260 332 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 NPY4RP50391 375 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 EDDM3BP56851 147 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 SETD6Q8TBK2 473 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 MRPL30Q8TCC3 161 aaKnown RBP17.2■□□□□ 0.34
CHD3-204ENST00000439235 RAB39BQ96DA2 213 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 NCOR1P1Q9H4R4 102 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 TAS2R8Q9NYW2 309 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 KIF25Q9UIL4 384 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 TRAPPC2LQ9UL33 140 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 ANAPC10Q9UM13 185 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 MGAT4AQ9UM21 535 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 USF3Q68DE3 2245 aa17.2■□□□□ 0.34
CHD3-204ENST00000439235 MEIKINA0A087WXM9 373 aa17.19■□□□□ 0.34
CHD3-204ENST00000439235 MT-ND4P03905 459 aa17.19■□□□□ 0.34
CHD3-204ENST00000439235 GSTT2BP0CG30 244 aa17.19■□□□□ 0.34
CHD3-204ENST00000439235 GDNFP39905 211 aa17.19■□□□□ 0.34
CHD3-204ENST00000439235 BAK1Q16611 211 aa17.19■□□□□ 0.34
CHD3-204ENST00000439235 SRSF7Q16629 238 aaKnown RBP eCLIP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms