RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZNF154Q13106 437 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 Q8IYB0 196 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM18Q96B42 140 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 GALMQ96C23 342 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 DEFB127Q9H1M4 99 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 KIAA1456Q9P272 454 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 OSGIN2Q9Y236 505 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 A0A1W2PR77 199 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 OR5B21A6NL26 309 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 SYNGR2O43760 224 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 FGF7P21781 194 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 ID4P47928 161 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM50BP56557 158 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 RBM11P57052 281 aaKnown RBP5.83□□□□□ -1.48
CSDE1-205ENST00000438362 DLK1P80370 383 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF816Q0VGE8 651 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-205ENST00000438362 MPV17LQ2QL34 196 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 BAGE3Q86Y29 109 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 BAGE2Q86Y30 109 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 HSF4Q9ULV5 492 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 PTPRZ1P23471 2315 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-205ENST00000438362 SVILO95425 2214 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 LOC390937A0A1W2PQ73 354 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 CYTIPO60759 359 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 CA6P23280 308 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 EIF3IQ13347 325 aaKnown RBP5.82□□□□□ -1.48
CSDE1-205ENST00000438362 FHL1Q13642 323 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM241Q24JQ0 296 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF66Q6ZN08 573 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM252Q8N6L7 170 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 APCDD1LQ8NCL9 501 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 FBXO17Q96EF6 278 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 Q96M66 194 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 SOX7Q9BT81 388 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 GPR35Q9HC97 309 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 SIRT7Q9NRC8 400 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 FBLN5Q9UBX5 448 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 CACFD1Q9UGQ2 172 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 AUP1Q9Y679 476 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 RPL36A-HNRNPH2H7BZ11 118 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 OPN1MWP04001 364 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 OPN1MW2P0DN77 364 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 OPN1MW3P0DN78 364 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 CCL4P13236 92 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 TNFSF4P23510 183 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 GPR12P47775 334 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 FGF8P55075 233 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-205ENST00000438362 PLAURQ03405 335 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 C1QL2Q7Z5L3 287 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 VASH2Q86V25 355 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 GCNT2Q8N0V5 402 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 SLC25A45Q8N413 288 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 C22orf15Q8WYQ4 148 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 WDR54Q9H977 334 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 TUBG2Q9NRH3 451 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 TAAR3PQ9P1P4 343 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 DUXBA0A1W2PPF3 345 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 ARGFXA6NJG6 315 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 B4DEV8 164 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 PITX3O75364 302 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 NGFP01138 241 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF17P17021 662 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 BCL3P20749 454 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 CEACAM6P40199 344 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 VHLLQ6RSH7 139 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 PAQR4Q8N4S7 273 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-205ENST00000438362 OR10AD1Q8NGE0 317 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 RNF126Q9BV68 326 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 MPC1Q9Y5U8 109 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 PLXND1Q9Y4D7 1925 aa5.82□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM30CPA0ZSE6 113 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF737O75373 536 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 DANCRP0C864 163 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 MPZP25189 248 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 PSG4Q00888 419 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 KHDC3LQ587J8 217 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 NSUN5P2Q63ZY6 315 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 FAM166AQ6J272 317 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ABHD3Q8WU67 409 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 EDARADDQ8WWZ3 215 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM37Q8WXS4 190 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 MOB3AQ96BX8 217 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 MUCL1Q96DR8 90 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 TAAR6Q96RI8 345 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 TWSG1Q9GZX9 223 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 TIMM8BQ9Y5J9 83 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 MPDZO75970 2070 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 HEATR5AQ86XA9 2040 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF320A2RRD8 509 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 RAMP1O60894 148 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 CELA2AP08217 269 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 CYC1P08574 325 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 MDH2P40926 338 aaKnown RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 RUNX1Q01196 453 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF92Q03936 586 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 SNAI3Q3KNW1 292 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 IGSF11Q5DX21 431 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF705AQ6ZN79 300 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 HIST1H2BAQ96A08 127 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms