RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ZNF107Q9UII5 783 aaPredicted RBP19.2■□□□□ 0.66
CPSF4-204ENST00000436336 ANKRD20A5PA0PJZ0 165 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 H7C1Q1 480 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 PPIHO43447 177 aaKnown RBP19.19■□□□□ 0.66
CPSF4-204ENST00000436336 FCGR3AP08637 254 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 PAX1P15863 534 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 AP3S2P59780 193 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 GRK1Q15835 563 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 ZNF497Q6ZNH5 498 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 SLC36A1Q7Z2H8 476 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 HOGA1Q86XE5 327 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 GAPTQ8N292 157 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 BARX1Q9HBU1 254 aaPredicted RBP19.19■□□□□ 0.66
CPSF4-204ENST00000436336 CHMP1AQ9HD42 196 aaPredicted RBP19.19■□□□□ 0.66
CPSF4-204ENST00000436336 KAAG1Q9UBP8 84 aa19.19■□□□□ 0.66
CPSF4-204ENST00000436336 POM121CA8CG34 1229 aa19.18■□□□□ 0.66
CPSF4-204ENST00000436336 MGST3O14880 152 aa19.18■□□□□ 0.66
CPSF4-204ENST00000436336 TMPRSS2O15393 492 aa19.18■□□□□ 0.66
CPSF4-204ENST00000436336 TK1P04183 234 aa19.18■□□□□ 0.66
CPSF4-204ENST00000436336 NAT1P18440 290 aa19.18■□□□□ 0.66
CPSF4-204ENST00000436336 KRTAP10-9P60411 292 aa19.18■□□□□ 0.66
CPSF4-204ENST00000436336 PAX5Q02548 391 aa19.18■□□□□ 0.66
CPSF4-204ENST00000436336 KLF9Q13886 244 aaPredicted RBP19.18■□□□□ 0.66
CPSF4-204ENST00000436336 OR5D13Q8NGL4 314 aa19.18■□□□□ 0.66
CPSF4-204ENST00000436336 EDARQ9UNE0 448 aa19.18■□□□□ 0.66
CPSF4-204ENST00000436336 DSCAML1Q8TD84 2053 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 TRBV6-6A0A0A6YYG2 114 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 DEFA1P59665 94 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 DEFA3P59666 94 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 RSBN1Q5VWQ0 802 aaPredicted RBP19.17■□□□□ 0.66
CPSF4-204ENST00000436336 HIST2H2BCQ6DN03 193 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 SLC35E4Q6ICL7 350 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 FAM216BQ8N7L0 139 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 TMEM229BQ8NBD8 167 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 SETD6Q8TBK2 473 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 MRPL30Q8TCC3 161 aaKnown RBP19.17■□□□□ 0.66
CPSF4-204ENST00000436336 DEDD2Q8WXF8 326 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 ST6GALNAC5Q9BVH7 336 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 ZNF230Q9UIE0 474 aaPredicted RBP19.17■□□□□ 0.66
CPSF4-204ENST00000436336 ADAM20O43506 726 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 FCER2P06734 321 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 TAS2R19P59542 299 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 DYRK1AQ13627 763 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 CARTPTQ16568 116 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 SRSF7Q16629 238 aaKnown RBP eCLIP19.17■□□□□ 0.66
CPSF4-204ENST00000436336 TMEM155Q4W5P6 130 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 AVPI1Q5T686 147 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 TMEM185AQ8NFB2 350 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 TBC1D24Q9ULP9 559 aa19.17■□□□□ 0.66
CPSF4-204ENST00000436336 LINC00854A0A1B0GVQ3 168 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 A0A1B0GW55 424 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 TMEM30CPA0ZSE6 113 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 SSX4O60224 188 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 DUX4L2P0CJ85 424 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 DUX4L3P0CJ86 424 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 DUX4L4P0CJ87 422 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 DUX4L5P0CJ88 424 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 DUX4L6P0CJ89 424 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 DUX4L7P0CJ90 424 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 GPR6P46095 362 aaPredicted RBP19.16■□□□□ 0.66
CPSF4-204ENST00000436336 ATP5J2P56134 94 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 AESQ08117 197 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 ASAH1Q13510 395 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 DUX4L9Q6RFH8 374 aaPredicted RBP19.16■□□□□ 0.66
CPSF4-204ENST00000436336 LYPD2Q6UXB3 125 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 ZNF525Q8N782 197 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 BEST4Q8NFU0 473 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 COQ2Q96H96 371 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 COX4I2Q96KJ9 171 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 DUX4Q9UBX2 424 aa19.16■□□□□ 0.66
CPSF4-204ENST00000436336 PLA2G10O15496 165 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 MT-ND4P03905 459 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 SELLP14151 372 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 PDLIM4P50479 330 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 KRBOX4Q5JUW0 171 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 OR52W1Q6IF63 320 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 ZNF880Q6PDB4 577 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 Q6ZPA2 131 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 OR4K15Q8NH41 348 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 SNAPC3Q92966 411 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 C7orf50Q9BRJ6 194 aaKnown RBP19.15■□□□□ 0.66
CPSF4-204ENST00000436336 GSX2Q9BZM3 304 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 Q9N2K0 584 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 ING3Q9NXR8 418 aa19.15■□□□□ 0.66
CPSF4-204ENST00000436336 ZNF736B4DX44 427 aaPredicted RBP19.14■□□□□ 0.66
CPSF4-204ENST00000436336 Q6ZS49 121 aa19.14■□□□□ 0.66
CPSF4-204ENST00000436336 GDPD3Q7L5L3 318 aa19.14■□□□□ 0.66
CPSF4-204ENST00000436336 MAFIPQ8WZ33 124 aa19.14■□□□□ 0.66
CPSF4-204ENST00000436336 ZNF286AQ9HBT8 521 aa19.14■□□□□ 0.66
CPSF4-204ENST00000436336 CEACAM18A8MTB9 384 aa19.14■□□□□ 0.65
CPSF4-204ENST00000436336 AKAIN1P0CW23 69 aa19.14■□□□□ 0.65
CPSF4-204ENST00000436336 GIFP27352 417 aa19.14■□□□□ 0.65
CPSF4-204ENST00000436336 HLA-DMAP28067 261 aa19.14■□□□□ 0.65
CPSF4-204ENST00000436336 ERP29P30040 261 aaKnown RBP19.14■□□□□ 0.65
CPSF4-204ENST00000436336 STEAP1BQ6NZ63 245 aa19.14■□□□□ 0.65
CPSF4-204ENST00000436336 MOB1BQ7L9L4 216 aa19.14■□□□□ 0.65
CPSF4-204ENST00000436336 SPICQ8N5J4 248 aa19.14■□□□□ 0.65
CPSF4-204ENST00000436336 POC5Q8NA72 575 aa19.14■□□□□ 0.65
CPSF4-204ENST00000436336 CTSZQ9UBR2 303 aa19.14■□□□□ 0.65
CPSF4-204ENST00000436336 SLC25A10Q9UBX3 287 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms