RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	KIR2DS1	A0A191URI9	304 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SLC22A20	A6NK97	555 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	CD300LB	A8K4G0	201 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	TRAPPC2L	H3BP13	241 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZNHIT1	O43257	154 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	NFYB	P25208	207 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	KIR2DS4	P43632	304 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	RAB1A	P62820	205 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	NHLH2	Q02577	135 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	KIR2DS1	Q14954	304 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	RNPS1	Q15287	305 aa	Known RBP	13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	FAM76B	Q5HYJ3	339 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	C5orf24	Q7Z6I8	188 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	LINC00596	Q86U02	117 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SELENOH	Q8IZQ5	122 aa	Known RBP	13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	OR5P3	Q8WZ94	311 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZNF552	Q9H707	407 aa	Predicted RBP	13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	STRAP	Q9Y3F4	350 aa	Known RBP	13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	KPTN	Q9Y664	436 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ATP23	Q9Y6H3	246 aa		13.76	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	IGKV1D-13	A0A0B4J2D9	117 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	TSPAN15	O95858	294 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	CTXN2	P0C2S0	81 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	IGKV1-13	P0DP09	117 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	UCP1	P25874	307 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PAX6	P26367	422 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	GNMT	Q14749	295 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	HMGN3	Q15651	99 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	MIDN	Q504T8	468 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZNF818P	Q6ZRF7	136 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SPIN2A	Q99865	258 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SPIN2B	Q9BPZ2	258 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ARRDC1-AS1	Q9H2J1	176 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	RIMS4	Q9H426	269 aa	Predicted RBP	13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PLK3	Q9H4B4	646 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PLA2G3	Q9NZ20	509 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	LHX6	Q9UPM6	363 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	TECTA	O75443	2155 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	FREM1	Q5H8C1	2179 aa		13.75	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	LNP1	A1A4G5	178 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SYNGR1	O43759	233 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	NMS	Q5H8A3	153 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	NUFIP2	Q7Z417	695 aa	Known RBP	13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	GAPT	Q8N292	157 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	OR2C3	Q8N628	320 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	KDF1	Q8NAX2	398 aa	Predicted RBP	13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SH3BGRL3	Q9H299	93 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SPACA1	Q9HBV2	294 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	MEX3A	A1L020	520 aa	Known RBP	13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ITGA3	P26006	1051 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	TSC22D1	Q15714	1073 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZNF880	Q6PDB4	577 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PCSK4	Q6UW60	755 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZNF565	Q8N9K5	539 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	MDS2	Q8NDY4	140 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	MRPL30	Q8TCC3	161 aa	Known RBP	13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SECTM1	Q8WVN6	248 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PARP12	Q9H0J9	701 aa	Known RBP	13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	C19orf12	Q9NSK7	152 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	MLX	Q9UH92	298 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	MPC1	Q9Y5U8	109 aa		13.74	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	OR5B21	A6NL26	309 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145		K7N7A8	449 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	NME2P1	O60361	137 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PITX3	O75364	302 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	CD59	P13987	128 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	WNT5A	P41221	380 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	NKX2-1	P43699	371 aa	Predicted RBP	13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PLP2	Q04941	152 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZNF695	Q8IW36	515 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	IL22RA2	Q969J5	263 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	IFT22	Q9H7X7	185 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	IGSF23	A1L1A6	192 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SP1	P08047	785 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	MMP9	P14780	707 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	CAMLG	P49069	296 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	FHIT	P49789	147 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PLGLB1	Q02325	96 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ID3	Q02535	119 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PEA15	Q15121	130 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	GUK1	Q16774	197 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	TMEM164	Q5U3C3	297 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	LINC00696	Q6ZRV3	163 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SUMF2	Q8NBJ7	301 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	AKR1E2	Q96JD6	320 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	HIST1H2AA	Q96QV6	131 aa		13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	LYRM2	Q9NU23	88 aa	Predicted RBP	13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.73	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZDBF2	Q9HCK1	2354 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	TRAV24	A0A0B4J272	114 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145		A0A1B0GW64	132 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	FAM24A	A6NFZ4	105 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	COLCA2	A8K830	154 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145		H0Y980	276 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	LILRA1	O75019	489 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	WNT2	P09544	360 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PRKACA	P17612	351 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms