RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 TMEM231Q9H6L2 316 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 PLA2G2EQ9NZK7 142 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 PRSS50Q9UI38 385 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 ZDHHC8Q9ULC8 765 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 ARHGAP21Q5T5U3 1957 aa15.91■□□□□ 0.14
CLK1-205ENST00000434813 OR5B21A6NL26 309 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 SYNGR1O43759 233 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 CDS2O95674 445 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 IL18BPO95998 194 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 MUC1P15941 1255 aaPredicted RBP15.9■□□□□ 0.14
CLK1-205ENST00000434813 APLNRP35414 380 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 WNT5AP41221 380 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 F2RL1P55085 397 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 SLC10A1Q14973 349 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 HERPUD1Q15011 391 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 OR1K1Q8NGR3 316 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 NRIP2Q9BQI9 281 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 SPACA1Q9HBV2 294 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 MPC1Q9Y5U8 109 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 POMT1Q9Y6A1 747 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 ANKRD30BLA7E2S9 258 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 CDRT15L2A8MXV6 281 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 TUSC2O75896 110 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 GLAP06280 429 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 CD46P15529 392 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 CLN3Q13286 438 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 MEX3BQ6ZN04 569 aaKnown RBP15.9■□□□□ 0.14
CLK1-205ENST00000434813 LYPD6BQ8NI32 183 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 TMEM56Q96MV1 263 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 TLNRD1Q9H1K6 362 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 TMEM56-RWDD3S4R434 201 aa15.9■□□□□ 0.14
CLK1-205ENST00000434813 PTPRZ1P23471 2315 aaPredicted RBP15.9■□□□□ 0.14
CLK1-205ENST00000434813 TRDCB7Z8K6 153 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 SCTP09683 121 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 CTXN2P0C2S0 81 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 TGIF1Q15583 401 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 HIKESHIQ53FT3 197 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 FAM122CQ6P4D5 195 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 HAGHLQ6PII5 290 aaPredicted RBP15.89■□□□□ 0.13
CLK1-205ENST00000434813 Q6ZRG5 221 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 TBC1D26Q86UD7 250 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 DMBX1Q8NFW5 382 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 NANOS1Q8WY41 292 aaKnown RBP15.89■□□□□ 0.13
CLK1-205ENST00000434813 BSCL2Q96G97 398 aaPredicted RBP15.89■□□□□ 0.13
CLK1-205ENST00000434813 USB1Q9BQ65 265 aaKnown RBP15.89■□□□□ 0.13
CLK1-205ENST00000434813 RIMS4Q9H426 269 aaPredicted RBP15.89■□□□□ 0.13
CLK1-205ENST00000434813 FAM96BQ9Y3D0 163 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 ATP23Q9Y6H3 246 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 FAM186AA6NE01 2351 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 ZNF407Q9C0G0 2248 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 BORCS7-ASMTA0A0B4J1R7 106 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 SEC11BP0C7V7 166 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 CTRB1P17538 263 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 PRKACAP17612 351 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 TSC22D1Q15714 1073 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 CTRB2Q6GPI1 263 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.89■□□□□ 0.13
CLK1-205ENST00000434813 ZNF573Q86YE8 665 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 ZNF565Q8N9K5 539 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 NEK7Q8TDX7 302 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 BCL2L2Q92843 193 aaPredicted RBP15.89■□□□□ 0.13
CLK1-205ENST00000434813 WDYHV1Q96HA8 205 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 C12orf49Q9H741 205 aa15.89■□□□□ 0.13
CLK1-205ENST00000434813 FAM212BQ9NTI7 297 aaPredicted RBP15.89■□□□□ 0.13
CLK1-205ENST00000434813 RCL1Q9Y2P8 373 aaKnown RBP15.89■□□□□ 0.13
CLK1-205ENST00000434813 ZNF292O60281 2723 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 SNAPINO95295 136 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 GNG3P63215 75 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 IL24Q13007 206 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 FBXW9Q5XUX1 488 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 ZNF818PQ6ZRF7 136 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 SECTM1Q8WVN6 248 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 GINS3Q9BRX5 216 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 WFDC1Q9HC57 220 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 GP6Q9HCN6 339 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 MED13Q9UHV7 2174 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 DMXL1Q9Y485 3027 aa15.88■□□□□ 0.13
CLK1-205ENST00000434813 TRBV6-6A0A0A6YYG2 114 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 SLC22A20A6NK97 555 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 HSPB6O14558 160 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 LILRA1O75019 489 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 CD5P06127 495 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 NOVA1P51513 510 aaKnown RBP15.87■□□□□ 0.13
CLK1-205ENST00000434813 SWI5Q1ZZU3 235 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 SUMF2Q8NBJ7 301 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 SPIN2AQ99865 258 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 SPIN2BQ9BPZ2 258 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 PKIBQ9C010 78 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 C11orf1Q9H5F2 150 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 LHX6Q9UPM6 363 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 ARID1AO14497 2285 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 GVINP1Q7Z2Y8 2422 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 IGKV1-6A0A0C4DH72 117 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 DUXBA0A1W2PPF3 345 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 RNASEK-C17orf49H0YIS7 233 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 H2AFB1P0C5Y9 115 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 IL32P24001 234 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 GNMTQ14749 295 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 SPIN3Q5JUX0 258 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 CLEC9AQ6UXN8 241 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms