RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 SLC33A1O00400 549 aaPredicted RBP10.13□□□□□ -0.79
CD44-209ENST00000433892 SSSCA1O60232 199 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 CDS2O95674 445 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 NAPSAO96009 420 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 NGFP01138 241 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 IGKV1-13P0DP09 117 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 DAOP14920 347 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 LHX2P50458 406 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 FGF12P61328 243 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 TGIF1Q15583 401 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 HMGN3Q15651 99 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 NRN1LQ496H8 165 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 MRPL21Q7Z2W9 205 aaKnown RBP10.13□□□□□ -0.79
CD44-209ENST00000433892 COMMD1Q8N668 190 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 OR2M7Q8NG81 312 aa10.13□□□□□ -0.79
CD44-209ENST00000433892 IGSF23A1L1A6 192 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 C7orf77A4D0Y5 90 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 SLC22A20A6NK97 555 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM166BA8MTA8 275 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 C3orf80F5H4A9 247 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 HSD17B6O14756 317 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 ADAM20O43506 726 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 NEURL1O76050 574 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 NXPH3O95157 252 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 ZNF44P15621 663 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 PPP1CCP36873 323 aaKnown RBP10.12□□□□□ -0.79
CD44-209ENST00000433892 RAB5CP51148 216 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 SRPXP78539 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 ZXDAP98168 799 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 CEACAM21Q3KPI0 293 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 TCEAL6Q6IPX3 200 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 ZDHHC23Q8IYP9 409 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 SELENOHQ8IZQ5 122 aaKnown RBP10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM185AQ8N0U4 392 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 C15orf54Q8N8G6 183 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 TCEAL3Q969E4 200 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 ISOC2Q96AB3 205 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 TMEM56Q96MV1 263 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 C12orf57Q99622 126 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 C11orf1Q9H5F2 150 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 ZNF552Q9H707 407 aaPredicted RBP10.12□□□□□ -0.79
CD44-209ENST00000433892 ZNF703Q9H7S9 590 aaPredicted RBP10.12□□□□□ -0.79
CD44-209ENST00000433892 STRAPQ9Y3F4 350 aaKnown RBP10.12□□□□□ -0.79
CD44-209ENST00000433892 TMEM56-RWDD3S4R434 201 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 DNAJC13O75165 2243 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 DOCK7Q96N67 2140 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A10PA6NDY2 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A18PA6NE21 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A16PA6NEW6 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A20PA6NIJ5 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A8PA6NJQ4 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A7PA6NKC0 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A22PA8MWA6 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A12PA8MX19 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A5PA8MXJ8 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A23PA8MXZ1 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 TNFSF12O43508 249 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 SYNGR1O43759 233 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A15PP0C7V4 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A13PP0C7W8 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A14PP0C7W9 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 FAM90A24PP0C7X0 464 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 CLDN18P56856 261 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 HABP2Q14520 560 aaPredicted RBP10.12□□□□□ -0.79
CD44-209ENST00000433892 Q6ZS49 121 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 LILRB1Q8NHL6 650 aaPredicted RBP10.12□□□□□ -0.79
CD44-209ENST00000433892 TMEM171Q8WVE6 324 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 ZNF488Q96MN9 340 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 RNF122Q9H9V4 155 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 COA4Q9NYJ1 87 aa10.12□□□□□ -0.79
CD44-209ENST00000433892 IGKV1-6A0A0C4DH72 117 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 UMAD1C9J7I0 102 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 TRAPPC2LH3BP13 241 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 GPR37O15354 613 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 OR13C7P0DN81 318 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 MAGEA5P43359 124 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 CD300LFQ8TDQ1 290 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 SFT2D1Q8WV19 159 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 FAM173AQ9BQD7 235 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 ABHD14AQ9BUJ0 271 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 LINC00470Q9BZP3 86 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 CCL28Q9NRJ3 127 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 ATPIF1Q9UII2 106 aa10.11□□□□□ -0.79
CD44-209ENST00000433892 ZNF724A8MTY0 619 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 CDRT15L2A8MXV6 281 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 PROB1E7EW31 1015 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 K7N7A8 449 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 CST7O76096 145 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 ACP1P24666 158 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 LMO1P25800 156 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 ATP6V0CP27449 155 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 RAB1AP62820 205 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 C20orf204Q6ZNR8 217 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 TMEM252Q8N6L7 170 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 ZFP62Q8NB50 900 aaPredicted RBP10.1□□□□□ -0.79
CD44-209ENST00000433892 OR2G3Q8NGZ4 309 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 APOBEC3DQ96AK3 386 aaPredicted RBP10.1□□□□□ -0.79
CD44-209ENST00000433892 POM121Q96HA1 1249 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 SPIN2AQ99865 258 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms