RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TRDCB7Z8K6 153 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 RP2O75695 350 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 OR2H2O95918 312 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 GLAP06280 429 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 HOXB5P09067 269 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 MSMPQ1L6U9 139 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 PAN3Q58A45 887 aaKnown RBP16.57■□□□□ 0.24
VRK2-205ENST00000432057 RGS7BPQ6MZT1 257 aaPredicted RBP16.57■□□□□ 0.24
VRK2-205ENST00000432057 TMEM65Q6PI78 240 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 C11orf53Q8IXP5 236 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 GTF3AQ92664 365 aaKnown RBP16.57■□□□□ 0.24
VRK2-205ENST00000432057 PIK3IP1Q96FE7 263 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 OR10C1Q96KK4 312 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 NAA60Q9H7X0 242 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 C1orf123Q9NWV4 160 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 UBQLN2Q9UHD9 624 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 SH3BGRL2Q9UJC5 107 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 ATP23Q9Y6H3 246 aa16.57■□□□□ 0.24
VRK2-205ENST00000432057 A0A0G2JNJ9 132 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 KIR2DS1A0A191URI9 304 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 SLC33A1O00400 549 aaPredicted RBP16.56■□□□□ 0.24
VRK2-205ENST00000432057 S100A1P23297 94 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 KIR2DS4P43632 304 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 UCP3P55916 312 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 TMPRSS3P57727 454 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 FAM27E3Q08E93 113 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 KIR2DS1Q14954 304 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 SLC38A6Q8IZM9 456 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 POC1AQ8NBT0 407 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 OR11L1Q8NGX0 322 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 MUCL1Q96DR8 90 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 RIMS4Q9H426 269 aaPredicted RBP16.56■□□□□ 0.24
VRK2-205ENST00000432057 SLC2A9Q9NRM0 540 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 MBD2Q9UBB5 411 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 Q9UFV3 132 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 MAP1BP46821 2468 aaKnown RBP16.56■□□□□ 0.24
VRK2-205ENST00000432057 TRBV6-6A0A0A6YYG2 114 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 IGKV1-6A0A0C4DH72 117 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 A8MXE2 369 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 HOXA4Q00056 320 aaPredicted RBP16.56■□□□□ 0.24
VRK2-205ENST00000432057 LRP11Q86VZ4 500 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 THAP6Q8TBB0 222 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 PLPPR1Q8TBJ4 325 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 RTN4IP1Q8WWV3 396 aaPredicted RBP16.56■□□□□ 0.24
VRK2-205ENST00000432057 SNRNP40Q96DI7 357 aaKnown RBP16.56■□□□□ 0.24
VRK2-205ENST00000432057 RSRP1Q9BUV0 290 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 RASL12Q9NYN1 266 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 MAB21L2Q9Y586 359 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 CADP27708 2225 aa16.56■□□□□ 0.24
VRK2-205ENST00000432057 A6NLC8 198 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 WNT9BO14905 357 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 RCC1P18754 421 aaPredicted RBP16.55■□□□□ 0.24
VRK2-205ENST00000432057 PSMB6P28072 239 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 CEBPDP49716 269 aaPredicted RBP16.55■□□□□ 0.24
VRK2-205ENST00000432057 ZNF146Q15072 292 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 ZNF880Q6PDB4 577 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 C1orf174Q8IYL3 243 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 PCNPQ8WW12 178 aaKnown RBP16.55■□□□□ 0.24
VRK2-205ENST00000432057 TMEM165Q9HC07 324 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 HES4Q9HCC6 221 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 UFSP2Q9NUQ7 469 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 ASF1BQ9NVP2 202 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 OR14J1Q9UGF5 321 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 RAXQ9Y2V3 346 aa16.55■□□□□ 0.24
VRK2-205ENST00000432057 RNF222A6NCQ9 220 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 TK1P04183 234 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 OR5AC1P0C628 307 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 CCKARP32238 428 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 HLA-DRB3P79483 266 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 CYCSP99999 105 aaKnown RBP16.54■□□□□ 0.24
VRK2-205ENST00000432057 SP6Q3SY56 376 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 SPIN3Q5JUX0 258 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 FAM219AQ8IW50 185 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 TLNRD1Q9H1K6 362 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 PIEZO1Q92508 2521 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 DIRAS3O95661 229 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 CRYAAP02489 173 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 MDH2P40926 338 aaKnown RBP16.54■□□□□ 0.24
VRK2-205ENST00000432057 TMEM187Q14656 261 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 C3orf36Q3SXR2 165 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 C22orf34Q6ZV56 151 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 C2orf50Q96LR7 162 aa16.54■□□□□ 0.24
VRK2-205ENST00000432057 IGF2RP11717 2491 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 TRAV39A0A0B4J263 110 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 RPS10-NUDT3A0A1W2PQS6 291 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 SH2D1BO14796 132 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 HAND1O96004 215 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 ACAA1P09110 424 aaPredicted RBP16.53■□□□□ 0.24
VRK2-205ENST00000432057 BEX5Q5H9J7 111 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 WDR82Q6UXN9 313 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 KCNRGQ8N5I3 272 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 SPERTQ8NA61 448 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 SECTM1Q8WVN6 248 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 MRPL24Q96A35 216 aaKnown RBP16.53■□□□□ 0.24
VRK2-205ENST00000432057 GALNT14Q96FL9 552 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 VRK1Q99986 396 aaPredicted RBP16.53■□□□□ 0.24
VRK2-205ENST00000432057 PIGMQ9H3S5 423 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 DUSP13Q9UII6 198 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 ZNF835Q9Y2P0 537 aa16.53■□□□□ 0.24
VRK2-205ENST00000432057 SPTBN4Q9H254 2564 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms