RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CEBPDP49716 269 aaPredicted RBP15.27■□□□□ 0.03
HMGN1-206ENST00000431390 SRSF7Q16629 238 aaKnown RBP eCLIP15.27■□□□□ 0.03
HMGN1-206ENST00000431390 TGIF2LYQ8IUE0 185 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 BPIFB2Q8N4F0 458 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 DUSP18Q8NEJ0 188 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 OR4S1Q8NGB4 309 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 OR4C16Q8NGL9 310 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 NEU4Q8WWR8 484 aaPredicted RBP15.27■□□□□ 0.03
HMGN1-206ENST00000431390 ST6GALNAC5Q9BVH7 336 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 CACNG6Q9BXT2 260 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF222Q9UK12 451 aa15.27■□□□□ 0.03
HMGN1-206ENST00000431390 TRBV6-6A0A0A6YYG2 114 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 OOEPA6NGQ2 149 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 H7C1Q1 480 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 SSX4O60224 188 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 RAB3DO95716 219 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 MT-ND4P03905 459 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 FCER2P06734 321 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 HLA-DMAP28067 261 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 RBMXP38159 391 aaKnown RBP15.26■□□□□ 0.03
HMGN1-206ENST00000431390 COL10A1Q03692 680 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 MEF2DQ14814 521 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 STUMQ69YW2 141 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 OR52W1Q6IF63 320 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 Q6ZNX1 250 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 CD177Q8N6Q3 437 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 BEST4Q8NFU0 473 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 ANGPTL6Q8NI99 470 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 CCL17Q92583 94 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 NRGNQ92686 78 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 OCEL1Q9H607 264 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 TMEM165Q9HC07 324 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 CHMP1AQ9HD42 196 aaPredicted RBP15.26■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF230Q9UIE0 474 aaPredicted RBP15.26■□□□□ 0.03
HMGN1-206ENST00000431390 LAMP3Q9UQV4 416 aa15.26■□□□□ 0.03
HMGN1-206ENST00000431390 SPG11Q96JI7 2443 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 IGHV3OR15-7A0A075B7D8 119 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 TRAV38-1A0A0B4J264 116 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 LGALS8O00214 317 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 PSPNO60542 156 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 AMY2BP19961 511 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 TAS2R46P59540 309 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 HFEQ30201 348 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 RNASE10Q5GAN6 216 aaKnown RBP15.25■□□□□ 0.03
HMGN1-206ENST00000431390 FAM201AQ5SY85 155 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 SFRP4Q6FHJ7 346 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-206ENST00000431390 CCBE1Q6UXH8 406 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-206ENST00000431390 C20orf204Q6ZNR8 217 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 Q6ZS49 121 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 GAPTQ8N292 157 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 OR5T2Q8NGG2 359 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 OR4K15Q8NH41 348 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 DPAGT1Q9H3H5 408 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 DCAF16Q9NXF7 216 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 COPZ2Q9P299 210 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 NAV3Q8IVL0 2385 aa15.25■□□□□ 0.03
HMGN1-206ENST00000431390 PPIAL4EA0A075B759 164 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 PPIAL4DF5H284 164 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 CSN2P05814 226 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 PPIAL4FP0DN26 164 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 SPNP16150 400 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 MRPS11P82912 194 aaKnown RBP15.24■□□□□ 0.03
HMGN1-206ENST00000431390 PLA1AQ53H76 456 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 OR4D10Q8NGI6 311 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 PPP1R35Q8TAP8 253 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 MRPL30Q8TCC3 161 aaKnown RBP15.24■□□□□ 0.03
HMGN1-206ENST00000431390 PPA2Q9H2U2 334 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 CLEC4MQ9H2X3 399 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF286AQ9HBT8 521 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 DLL4Q9NR61 685 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 MCUBQ9NWR8 336 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 PPIAL4AQ9Y536 164 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 CD99P14209 185 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 HOXB4P17483 251 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-206ENST00000431390 GIFP27352 417 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 HRH1P35367 487 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 OR3A1P47881 315 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 PAX5Q02548 391 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 VAX1Q5SQQ9 334 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 FAAP20Q6NZ36 180 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF497Q6ZNH5 498 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 C17orf107Q6ZR85 190 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF561Q8N587 486 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 OR5AP2Q8NGF4 316 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 SDSLQ96GA7 329 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 SNX22Q96L94 193 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 TMUB1Q9BVT8 246 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 TINAGL1Q9GZM7 467 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-206ENST00000431390 DNTTIP1Q9H147 329 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 PLEKHF2Q9H8W4 249 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 Q9N2K0 584 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 ANXA10Q9UJ72 324 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 METRNQ9UJH8 293 aa15.24■□□□□ 0.03
HMGN1-206ENST00000431390 DSCAMO60469 2012 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 PRRC2AP48634 2157 aaKnown RBP15.23■□□□□ 0.03
HMGN1-206ENST00000431390 TMEM82A0PJX8 343 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 DISC1C4P0D8 188 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 M0QYG6 137 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF737O75373 536 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 FSTL3O95633 263 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms