RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ACSM6Q6P461 480 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
PTCH1-207ENST00000429896 IGHV3-43A0A0B4J1X8 118 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 FAM157AC9JC47 383 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 CDIPTO14735 213 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 IGHV3-43DP0DP04 118 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 SPICQ8N5J4 248 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 DDOQ99489 341 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 PSENENQ9NZ42 101 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 H2AFB1P0C5Y9 115 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 OR3A4PP47883 348 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 ERHP84090 104 aaKnown RBP11.22□□□□□ -0.61
PTCH1-207ENST00000429896 LINC00114Q6XXX2 140 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 LRRTM1Q86UE6 522 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 KLHDC2Q9Y2U9 406 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 OGG1O15527 345 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 EPXP11678 715 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 GALP22466 123 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 DMKNQ6E0U4 476 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-207ENST00000429896 OR5A2Q8NGI9 324 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 ADAMTS17Q8TE56 1095 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 ZNF230Q9UIE0 474 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-207ENST00000429896 hADV38S2A0JD32 116 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 ADH4P08319 380 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 PTGDSP41222 190 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 GUCA2AQ02747 115 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 GALMQ96C23 342 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 COMMD5Q9GZQ3 224 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 SRRQ9GZT4 340 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 PTPRSQ13332 1948 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 APELAP0DMC3 54 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 S100A11P31949 105 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 TEX30Q5JUR7 227 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 AVPI1Q5T686 147 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 OR52N4Q8NGI2 321 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 ZDHHC8Q9ULC8 765 aa11.21□□□□□ -0.61
PTCH1-207ENST00000429896 SMPD2O60906 423 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 NGFP01138 241 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 DCTDP32321 178 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 PTTG1IPP53801 180 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 SRPXP78539 464 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 RPUSD3Q6P087 351 aaKnown RBP11.21□□□□□ -0.62
PTCH1-207ENST00000429896 TRAT1Q6PIZ9 186 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 RELL2Q8NC24 303 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-207ENST00000429896 BLNKQ8WV28 456 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 PRDM14Q9GZV8 571 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 TMPRSS2O15393 492 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 CCL8P80075 99 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 TGIF2LXQ8IUE1 241 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 MUC20Q8N307 709 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-207ENST00000429896 RXFP4Q8TDU9 374 aa11.21□□□□□ -0.62
PTCH1-207ENST00000429896 EP300Q09472 2414 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-207ENST00000429896 J3QT63 122 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 SLC25A4P12235 298 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 IGFL3Q6UXB1 125 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 A0A0A6YYJ9 748 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 SMIM17P0DL12 118 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 TIMP3P35625 211 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 MARCH1Q8TCQ1 289 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 NEURL2Q9BR09 285 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 PIMREGQ9BSJ6 248 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 WNT5BQ9H1J7 359 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 AUNIPQ9H7T9 357 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 SERPINE3A8MV23 424 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 SPNP16150 400 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 IGHV1-2P23083 117 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 OR2B8PP59922 312 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 PNLIPRP3Q17RR3 467 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 ZNF665Q9H7R5 613 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 DOK5Q9P104 306 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 CACNA1EQ15878 2313 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 RFX2P48378 723 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 FOXO1Q12778 655 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 BTNL8Q6UX41 500 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 MOB1BQ7L9L4 216 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 LHFPL6Q9Y693 200 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 G0S2P27469 103 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 CRYBB2P43320 205 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 EVX1P49640 407 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 NAAAQ02083 359 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 EDARADDQ8WWZ3 215 aa11.2□□□□□ -0.62
PTCH1-207ENST00000429896 PPIAL4EA0A075B759 164 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 PPIAL4DF5H284 164 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 PPIAL4FP0DN26 164 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 ETV6P41212 452 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 PIGPP57054 158 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 KIAA0141Q14154 515 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-207ENST00000429896 TMED6Q8WW62 240 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 RNF122Q9H9V4 155 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 RCL1Q9Y2P8 373 aaKnown RBP11.19□□□□□ -0.62
PTCH1-207ENST00000429896 PPIAL4AQ9Y536 164 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 B9A039 149 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 ATP5J2P56134 94 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 DPF1Q92782 380 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 SLC25A32Q9H2D1 315 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 ZDHHC11Q9H8X9 412 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 A0A0U1RQV5 110 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 UMAD1C9J7I0 102 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 IFNL4K9M1U5 179 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 SSX1Q16384 188 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms