RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 MSMO1Q15800 293 aa12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 PAQR4Q8N4S7 273 aaPredicted RBP12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 ABHD6Q9BV23 337 aa12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 ARRDC1-AS1Q9H2J1 176 aa12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 CENPVL1A0A0U1RR11 272 aa12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 J3QW42 95 aa12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 RBMXL2O75526 392 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 EPHA8P29322 1005 aaPredicted RBP12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 MEX3BQ6ZN04 569 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 OR10W1Q8NGF6 305 aa12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 OR10S1Q8NGN2 331 aa12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 CLDN23Q96B33 292 aa12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 NAT8Q9UHE5 227 aa12.66□□□□□ -0.38
SYNGAP1-203ENST00000428982 TRBV5-5A0A0J9YX44 114 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 FIGNL2A6NMB9 653 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 GNB3P16520 340 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 CPEB2Q7Z5Q1 589 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 CDC20BQ86Y33 519 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 OTOSQ8NHW6 89 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 EMG1Q92979 244 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 SCARF2Q96GP6 870 aaPredicted RBP12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 MMP25Q9NPA2 562 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 MRM2Q9UI43 246 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 HELZP42694 1942 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 PLXNA2O75051 1894 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 VSTM2BA6NLU5 285 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 PET117Q6UWS5 81 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 BHLHE23Q8NDY6 225 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 OR5D14Q8NGL3 314 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 LPAR4Q99677 370 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 A8MVM7 634 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 J3QR89 54 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 SDCBPO00560 298 aaPredicted RBP12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 MSTNO14793 375 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 HCRTR1O43613 425 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 SCRG1O75711 98 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 IL18BPO95998 194 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 EFNA3P52797 238 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 OR11L1Q8NGX0 322 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 OR6C1Q96RD1 312 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 GFI1Q99684 422 aa12.65□□□□□ -0.38
SYNGAP1-203ENST00000428982 FAM157AC9JC47 383 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 TSPAN2O60636 221 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 CT62P0C5K7 136 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 TAS2R46P59540 309 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 NANOS3P60323 173 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 FAM53BQ14153 422 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 PMS2CLQ68D20 193 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 KMT5CQ86Y97 462 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 CISD2Q8N5K1 135 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 C16orf52Q8NHV5 167 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 ZNF48Q96MX3 618 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 SPTBP11277 2137 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 H7C1C5 153 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 CLEC3BP05452 202 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 PSG1P11464 419 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 GLRA1P23415 457 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 CDKN2AP42771 156 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 PPP1CBP62140 327 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 SLC22A24Q8N4F4 322 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 STPG4Q8N801 248 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 TAS2R4Q9NYW5 299 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 A0A1B0GTH9 108 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 C4orf47A7E2U8 309 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 M0R1X1 148 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 VAMP5O95183 116 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 CRISP2P16562 243 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 MPLP40238 635 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 RPL24P83731 157 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 OR51A4Q8NGJ6 313 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 RNF128Q8TEB7 428 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 ERGIC1Q969X5 290 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 ADOQ96SZ5 270 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 SF3B5Q9BWJ5 86 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 PLXNB3Q9ULL4 1909 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 LYPD3O95274 346 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 GNRHRP30968 328 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 PSG6Q00889 435 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 HIST3H3Q16695 136 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 TGIF2LYQ8IUE0 185 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 TMEM186Q96B77 213 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 VSTM2LQ96N03 204 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 PPP1R3CQ9UQK1 317 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 WASHC3Q9Y3C0 194 aa12.64□□□□□ -0.39
SYNGAP1-203ENST00000428982 HRASP01112 189 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 ZNF708P17019 499 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 LPAR5Q9H1C0 372 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 ALPK3Q96L96 1907 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 SERTM2A0A1B0GWG4 89 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 DEDDO75618 318 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 PMCHP20382 165 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 FAM78BQ5VT40 261 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 DENND4CQ5VZ89 1909 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 LINC01551Q86U37 167 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 WFDC8Q8IUA0 241 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 ZNF439Q8NDP4 499 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 LRFN3Q9BTN0 628 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 CLEC18AA5D8T8 446 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 GAGE10A6NGK3 116 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 SLC33A1O00400 549 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms