RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 TMEM218A2RU14 115 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 MED6O75586 246 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 CRYBA1P05813 215 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 CST2P09228 141 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 FTH1P19P0C7X4 201 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 ZNF883P0CG24 379 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 IGHV3-43DP0DP04 118 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 AADACP22760 399 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 PSMB6P28072 239 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 WNT5AP41221 380 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 FBXW12Q6X9E4 464 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 HSD17B13Q7Z5P4 300 aaPredicted RBP7.18□□□□□ -1.26
CD44-208ENST00000428726 ZCCHC24Q8N2G6 241 aaKnown RBP7.18□□□□□ -1.26
CD44-208ENST00000428726 KCNRGQ8N5I3 272 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 OR4A4PQ8NGN8 299 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 HPSE2Q8WWQ2 592 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 CPNE4Q96A23 557 aaPredicted RBP7.18□□□□□ -1.26
CD44-208ENST00000428726 AKR1E2Q96JD6 320 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 MRPS18CQ9Y3D5 142 aaKnown RBP7.18□□□□□ -1.26
CD44-208ENST00000428726 CEACAM18A8MTB9 384 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 SERPINE3A8MV23 424 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 NME2P1O60361 137 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 OR2F2O95006 317 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 SNRPEP62304 92 aaKnown RBP7.18□□□□□ -1.26
CD44-208ENST00000428726 UBA52P62987 128 aaKnown RBP7.18□□□□□ -1.26
CD44-208ENST00000428726 NHLH2Q02577 135 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 PRB3Q04118 309 aaPredicted RBP7.18□□□□□ -1.26
CD44-208ENST00000428726 ZNF616Q08AN1 781 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 OR2F1Q13607 317 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 ZNF345Q14585 488 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 TMEM128Q5BJH2 165 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 KRBOX4Q5JUW0 171 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 RTL6Q6ICC9 239 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 DBX2Q6ZNG2 339 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 GTF3AQ92664 365 aaKnown RBP7.18□□□□□ -1.26
CD44-208ENST00000428726 ERGIC1Q969X5 290 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 DCTN5Q9BTE1 182 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 TM2D1Q9BX74 207 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 DNTTIP1Q9H147 329 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 B4GALT7Q9UBV7 327 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 C14orf166Q9Y224 244 aaKnown RBP7.18□□□□□ -1.26
CD44-208ENST00000428726 AMDHD2Q9Y303 409 aa7.18□□□□□ -1.26
CD44-208ENST00000428726 TRGV5A0A0B4J1U4 118 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 IGKV1D-13A0A0B4J2D9 117 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 SOX15O60248 233 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 CST7O76096 145 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 SNRNP70P08621 437 aaKnown RBP7.17□□□□□ -1.26
CD44-208ENST00000428726 FCGR3AP08637 254 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 MMP7P09237 267 aaPredicted RBP7.17□□□□□ -1.26
CD44-208ENST00000428726 IGKV1-13P0DP09 117 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 TAS2R46P59540 309 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 OR2B8PP59922 312 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 HFEQ30201 348 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 ZFP62Q8NB50 900 aaPredicted RBP7.17□□□□□ -1.26
CD44-208ENST00000428726 NANPQ8TBE9 248 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 RXFP4Q8TDU9 374 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 RTN4IP1Q8WWV3 396 aaPredicted RBP7.17□□□□□ -1.26
CD44-208ENST00000428726 EXTL1Q92935 676 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 Q96M66 194 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 ANXA10Q9UJ72 324 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 PPP1R3CQ9UQK1 317 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 TRBV23-1A0A0A0MS06 115 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 hCG_38984A0A1B0GV85 526 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 SLC22A20A6NK97 555 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 FOXI3A8MTJ6 420 aaPredicted RBP7.17□□□□□ -1.26
CD44-208ENST00000428726 CYTIPO60759 359 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 CA11O75493 328 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 IL18BPO95998 194 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 ARG1P05089 322 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 CRHP06850 196 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 ZNF806P0C7X5 589 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 MUC1P15941 1255 aaPredicted RBP7.17□□□□□ -1.26
CD44-208ENST00000428726 CAV2P51636 162 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 PPA1Q15181 289 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 PRAMEF6Q5VXH4 476 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 GGNBP1Q5YKI7 109 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 ZNF808Q8N4W9 903 aaPredicted RBP7.17□□□□□ -1.26
CD44-208ENST00000428726 SPSB1Q96BD6 273 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 TP53RKQ96S44 253 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 OPN3Q9H1Y3 402 aaPredicted RBP7.17□□□□□ -1.26
CD44-208ENST00000428726 SLC25A32Q9H2D1 315 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 CCL28Q9NRJ3 127 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 EDARQ9UNE0 448 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 UTP20O75691 2785 aaKnown RBP7.17□□□□□ -1.26
CD44-208ENST00000428726 PLXNB1O43157 2135 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 ZNF98A6NK75 572 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 DBX1A6NMT0 343 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 CD300LBA8K4G0 201 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 ZNF728P0DKX0 622 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 ERVFRD-1P60508 538 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 PLP2Q04941 152 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 MALLQ13021 153 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 RIPPLY2Q5TAB7 128 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 ABLIM2Q6H8Q1 611 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 BAP18Q8IXM2 172 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 C14orf79Q96F83 325 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 KIRREL1Q96J84 757 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 DDA1Q9BW61 102 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 SH3BGRL3Q9H299 93 aa7.17□□□□□ -1.26
CD44-208ENST00000428726 OR1A1Q9P1Q5 309 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms