RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 RTN4RQ9BZR6 473 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 NKX2-4Q9H2Z4 354 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 EPG5Q9HCE0 2579 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 LINC01553A4QN01 128 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 TUSC2O75896 110 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 EML2O95834 649 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 SERPINA2P20848 420 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 GNRHRP30968 328 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 RSPO1Q2MKA7 263 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 TDRG1Q3Y452 100 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 POMZP3Q6PJE2 187 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 RTN4RL2Q86UN3 420 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 FAM185AQ8N0U4 392 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 POC1BQ8TC44 478 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 IL22RA2Q969J5 263 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 JSRP1Q96MG2 331 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 PARD6GQ9BYG4 376 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 ZNF665Q9H7R5 613 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 MANSC4A6NHS7 340 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 NXPH2O95156 264 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 IL3RAP26951 378 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 CD82P27701 267 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 COMPP49747 757 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 COL10A1Q03692 680 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 POM121L1PQ3SYA9 428 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 AKIRIN2Q53H80 203 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 C9orf50Q5SZB4 431 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 OR2T10Q8NGZ9 312 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 CAPNS2Q96L46 248 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 MIEN1Q9BRT3 115 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 B3GAT1Q9P2W7 334 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 LHFPL6Q9Y693 200 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 LOC102723971A0A1B0GUV8 181 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 CNN1P51911 297 aaKnown RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 ACTL10Q5JWF8 245 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 RNF144BQ7Z419 303 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 FGF22Q9HCT0 170 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 C14orf166Q9Y224 244 aaKnown RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 WIPI2Q9Y4P8 454 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 SVEP1Q4LDE5 3571 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 IGHV2-70DA0A0C4DH43 119 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 SMAD9O15198 467 aaKnown RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 HCRTR1O43613 425 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 RAB38P57729 211 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 DAZAP2Q15038 168 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 C1QL2Q7Z5L3 287 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 OR5C1Q8NGR4 320 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 TSLPQ969D9 159 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 RIMS4Q9H426 269 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 ELL3Q9HB65 397 aaPredicted RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 CBLN4Q9NTU7 201 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 CISD1Q9NZ45 108 aaKnown RBP4.45□□□□□ -1.7
RIF1-203ENST00000428287 CUBNO60494 3623 aa4.45□□□□□ -1.7
RIF1-203ENST00000428287 IL33O95760 270 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 RANP62826 216 aaKnown RBP4.44□□□□□ -1.7
RIF1-203ENST00000428287 OR5I1Q13606 314 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 COTL1Q14019 142 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 PDZD11Q5EBL8 140 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 FIGLAQ6QHK4 219 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 SLC38A9Q8NBW4 561 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 OR52M1Q8NGK5 317 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 RNASE8Q8TDE3 154 aaKnown RBP4.44□□□□□ -1.7
RIF1-203ENST00000428287 HAS2Q92819 552 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 PLEKHF2Q9H8W4 249 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 H7C1C5 153 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 HPNP05981 417 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 BLVRBP30043 206 aaPredicted RBP4.44□□□□□ -1.7
RIF1-203ENST00000428287 LCN6P62502 163 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 TCEA2Q15560 299 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 ADIPOR1Q96A54 375 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 RNF2Q99496 336 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 TMEM222Q9H0R3 208 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 OR10A2Q9H208 303 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 MRPS2Q9Y399 296 aaKnown RBP4.44□□□□□ -1.7
RIF1-203ENST00000428287 MAP1LC3B2A6NCE7 125 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 MS4A18H0YCH9 400 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 TNFRSF10CO14798 259 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 MS4A18Q3C1V0 323 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 C4orf17Q53FE4 359 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 CACUL1Q86Y37 369 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 IL22RA1Q8N6P7 574 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 BCORP1Q8N888 145 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 ZNF721Q8TF20 911 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 PINX1Q96BK5 328 aaKnown RBP4.44□□□□□ -1.7
RIF1-203ENST00000428287 MAP1LC3BQ9GZQ8 125 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 PNRC2Q9NPJ4 139 aaKnown RBP4.44□□□□□ -1.7
RIF1-203ENST00000428287 FKBP11Q9NYL4 201 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 AK3Q9UIJ7 227 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 XKRY2A2RUG3 117 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 H7BYZ3 331 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 SCDO00767 359 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 XRCC2O43543 280 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 ZNF121P58317 390 aaPredicted RBP4.44□□□□□ -1.7
RIF1-203ENST00000428287 TRIP6Q15654 476 aaKnown RBP4.44□□□□□ -1.7
RIF1-203ENST00000428287 GLIPR1L1Q6UWM5 242 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 C1orf174Q8IYL3 243 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 NEK7Q8TDX7 302 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 RRAGCQ9HB90 399 aa4.44□□□□□ -1.7
RIF1-203ENST00000428287 TRBV11-1A0A0K0K1C0 115 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms