RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.24□□□□□ -0.93
USP54-204ENST00000422491 ZNF787Q6DD87 383 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 ZNF695Q8IW36 515 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 ZNF784Q8NCA9 323 aaPredicted RBP9.24□□□□□ -0.93
USP54-204ENST00000422491 ADPRHL1Q8NDY3 354 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 RPP25Q9BUL9 199 aaKnown RBP9.24□□□□□ -0.93
USP54-204ENST00000422491 ZNF286AQ9HBT8 521 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 RPRMQ9NS64 109 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 RNF115Q9Y4L5 304 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 IGKV1-27A0A075B6S5 117 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 CCDC163A0A0D9SF12 145 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 CCL5P13501 91 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 GNRHRP30968 328 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 NUBP1P53384 320 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 IL24Q13007 206 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 IQCJQ1A5X6 159 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 ZNF66Q6ZN08 573 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 SSX7Q7RTT5 188 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 C16orf82Q7Z2V1 217 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 THNSL2Q86YJ6 484 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 PRSS58Q8IYP2 241 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 FAM185AQ8N0U4 392 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 OR51G1Q8NGK1 321 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 OR2V1Q8NHB1 315 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 TMEM170AQ8WVE7 144 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 MBD3L1Q8WWY6 194 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 ZNF845Q96IR2 970 aaPredicted RBP9.24□□□□□ -0.93
USP54-204ENST00000422491 IL23AQ9NPF7 189 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 GPR173Q9NS66 373 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 LAMP3Q9UQV4 416 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 EXPH5Q8NEV8 1989 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 KIR2DL5BA0A0G2JN68 375 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 KIR2DL5BA0A0G2JPC4 375 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 SPTY2D1-AS1A0A0U1RR47 76 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 CHST1O43916 411 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 SOX15O60248 233 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 FGF5P12034 268 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 NPBWR2P48146 333 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 PIGYQ3MUY2 71 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 CENPVQ7Z7K6 275 aaPredicted RBP9.24□□□□□ -0.93
USP54-204ENST00000422491 TBC1D26Q86UD7 250 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 KIR2DL5AQ8N109 375 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 CAPNS2Q96L46 248 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 UBE2J1Q9Y385 318 aaPredicted RBP9.24□□□□□ -0.93
USP54-204ENST00000422491 PIAS3Q9Y6X2 628 aa9.24□□□□□ -0.93
USP54-204ENST00000422491 REV3LO60673 3130 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 TMEM210A6NLX4 147 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 B4E171 279 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 SLC33A1O00400 549 aaPredicted RBP9.23□□□□□ -0.93
USP54-204ENST00000422491 MBP02144 154 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 OPN1LWP04000 364 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 OTX1P32242 354 aaPredicted RBP9.23□□□□□ -0.93
USP54-204ENST00000422491 TSPAN7P41732 249 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 PMS2P11Q13670 270 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 DCAF10Q5QP82 559 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 LCN15Q6UWW0 184 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 POC1BQ8TC44 478 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 TMEM18Q96B42 140 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 SPSB1Q96BD6 273 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 VSIRQ9H7M9 311 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 NXPH3O95157 252 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 MMP7P09237 267 aaPredicted RBP9.23□□□□□ -0.93
USP54-204ENST00000422491 FGF8P55075 233 aaPredicted RBP9.23□□□□□ -0.93
USP54-204ENST00000422491 ERVS71-1P61550 626 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 C1orf194Q5T5A4 169 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 C1orf189Q5VU69 101 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 PARM1Q6UWI2 310 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 ASCL4Q6XD76 172 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 CYP2G1PQ6ZSU1 146 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 ZNF295-AS1Q8N0V1 137 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 NAT6Q93015 286 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 AGMATQ9BSE5 352 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 RSG1Q9BU20 258 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 NAT8Q9UHE5 227 aa9.23□□□□□ -0.93
USP54-204ENST00000422491 PCDH15Q96QU1 1955 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 IGKV1-12A0A0C4DH73 117 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 A0A1W2PNR3 127 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 PPP5D1E7EU14 171 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 C5orf67F2Z3F1 127 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 DLEU1O43261 78 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 IGKV1D-12P01611 117 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 HLA-HP01893 362 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 METTL15P1P0C7V9 234 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 CCKARP32238 428 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 FAM3BP58499 235 aaPredicted RBP9.22□□□□□ -0.93
USP54-204ENST00000422491 ENDOGQ14249 297 aaKnown RBP9.22□□□□□ -0.93
USP54-204ENST00000422491 OR8B8Q15620 311 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 ADIRFQ15847 76 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 SNAI3Q3KNW1 292 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 SLC25A53Q5H9E4 307 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 ACTL10Q5JWF8 245 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 NCR3LG1Q68D85 454 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 NECAP1Q8NC96 275 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 TMEM208Q9BTX3 173 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 LRRC61Q9BV99 259 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 PLSCR2Q9NRY7 297 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 MYOTQ9UBF9 498 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 DUXBA0A1W2PPF3 345 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 C10orf142B7Z368 130 aa9.22□□□□□ -0.93
USP54-204ENST00000422491 OR2J2O76002 312 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms