RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 NPTNQ9Y639 398 aa8.42□□□□□ -1.06
CMSS1-201ENST00000421999 TMEM210A6NLX4 147 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 SMAD7O15105 426 aaKnown RBP8.41□□□□□ -1.06
CMSS1-201ENST00000421999 CTAG2O75638 210 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 CLEC3BP05452 202 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 WT1P19544 449 aaPredicted RBP8.41□□□□□ -1.06
CMSS1-201ENST00000421999 CD40P25942 277 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 PRDX2P32119 198 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 MDH2P40926 338 aaKnown RBP8.41□□□□□ -1.06
CMSS1-201ENST00000421999 SNAI3Q3KNW1 292 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 PHYHD1Q5SRE7 291 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF75AQ96N20 296 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 TSNAXQ99598 290 aaKnown RBP8.41□□□□□ -1.06
CMSS1-201ENST00000421999 CCL19Q99731 98 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 WIPI2Q9Y4P8 454 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 H3BP45 60 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 IAPPP10997 89 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 CPN1P15169 458 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 RAB7AP51149 207 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 GABRA6Q16445 453 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 TRAT1Q6PIZ9 186 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 C17orf107Q6ZR85 190 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 GGNQ86UU5 652 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 MUC20Q8N307 709 aaPredicted RBP8.41□□□□□ -1.06
CMSS1-201ENST00000421999 GVQW1Q8N7I0 195 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 OR8G5Q8NG78 346 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 RNASE6Q93091 150 aaKnown RBP8.41□□□□□ -1.06
CMSS1-201ENST00000421999 AKIP1Q9NQ31 210 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 SLC17A5Q9NRA2 495 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 ANKHD1Q8IWZ3 2542 aaKnown RBP8.41□□□□□ -1.06
CMSS1-201ENST00000421999 A0A0U1RQV5 110 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 LMX1BO60663 402 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 HRASP01112 189 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 OPN1MWP04001 364 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 OPN1MW2P0DN77 364 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 OPN1MW3P0DN78 364 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 GLRXP35754 106 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 BSPH1Q075Z2 132 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 C10orf128Q5T292 105 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 TMEM54Q969K7 222 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 PGLYRP3Q96LB9 341 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 MRPL13Q9BYD1 178 aaKnown RBP8.41□□□□□ -1.06
CMSS1-201ENST00000421999 IL19Q9UHD0 177 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 AMMECR1Q9Y4X0 333 aaPredicted RBP8.41□□□□□ -1.06
CMSS1-201ENST00000421999 CEP192Q8TEP8 1941 aa8.41□□□□□ -1.06
CMSS1-201ENST00000421999 TMEM127O75204 238 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 RNFT1Q5M7Z0 435 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 CST9LP1Q5W188 147 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 CCDC190Q86UF4 302 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 THNSL2Q86YJ6 484 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 TAAR6Q96RI8 345 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 RANGRFQ9HD47 186 aaPredicted RBP8.4□□□□□ -1.06
CMSS1-201ENST00000421999 ZDHHC8Q9ULC8 765 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 CLDN14O95500 239 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 GFRA1P56159 465 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 CEACAM21Q3KPI0 293 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 Q6ZRG5 221 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 TGIF2LYQ8IUE0 185 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 TGIF2LXQ8IUE1 241 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 DEDD2Q8WXF8 326 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 TMEM230Q96A57 120 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 LINC00470Q9BZP3 86 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 SRRQ9GZT4 340 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF629Q9UEG4 869 aaPredicted RBP8.4□□□□□ -1.06
CMSS1-201ENST00000421999 INSIG2Q9Y5U4 225 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 ZNF716A6NP11 495 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 B9A039 149 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 M0QZ24 198 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 APOBEC3AP31941 199 aaPredicted RBP8.4□□□□□ -1.06
CMSS1-201ENST00000421999 TAS2R30P59541 319 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 Q6ZS92 163 aa8.4□□□□□ -1.06
CMSS1-201ENST00000421999 TIMM8BQ9Y5J9 83 aaPredicted RBP8.4□□□□□ -1.06
CMSS1-201ENST00000421999 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.4□□□□□ -1.07
CMSS1-201ENST00000421999 C17orf112F2Z3M2 114 aa8.4□□□□□ -1.07
CMSS1-201ENST00000421999 CDK2AP1O14519 115 aa8.4□□□□□ -1.07
CMSS1-201ENST00000421999 OR5G3P0C626 314 aa8.4□□□□□ -1.07
CMSS1-201ENST00000421999 IGHV1-2P23083 117 aa8.4□□□□□ -1.07
CMSS1-201ENST00000421999 TAGLNQ01995 201 aaKnown RBP8.4□□□□□ -1.07
CMSS1-201ENST00000421999 ENDOGQ14249 297 aaKnown RBP8.4□□□□□ -1.07
CMSS1-201ENST00000421999 IGFBP7Q16270 282 aa8.4□□□□□ -1.07
CMSS1-201ENST00000421999 MPV17LQ2QL34 196 aa8.4□□□□□ -1.07
CMSS1-201ENST00000421999 DOCK10Q96BY6 2186 aa8.4□□□□□ -1.07
CMSS1-201ENST00000421999 ZFP92A6NM28 416 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 CYB5R3P00387 301 aaPredicted RBP8.39□□□□□ -1.07
CMSS1-201ENST00000421999 FABP1P07148 127 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 DYRK1AQ13627 763 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 PROK2Q9HC23 129 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 SLC35D1Q9NTN3 355 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 A0A0U1RQK1 487 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 A0A1W2PPE3 182 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 VSIG8P0DPA2 414 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 DTYMKP23919 212 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 AKR1D1P51857 326 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 FOXF2Q12947 444 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 SLC7A5P1Q8MH63 180 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 TMEM123Q8N131 208 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 TMEM45BQ96B21 275 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 PIMREGQ9BSJ6 248 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 PECRQ9BY49 303 aa8.39□□□□□ -1.07
CMSS1-201ENST00000421999 BARX1Q9HBU1 254 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms